156 related articles for article (PubMed ID: 26458130)
1. Comprehensive Meta-analysis of Ontology Annotated 16S rRNA Profiles Identifies Beta Diversity Clusters of Environmental Bacterial Communities.
Henschel A; Anwar MZ; Manohar V
PLoS Comput Biol; 2015 Oct; 11(10):e1004468. PubMed ID: 26458130
[TBL] [Abstract][Full Text] [Related]
2. Evaluation of 16S rRNA amplicon sequencing using two next-generation sequencing technologies for phylogenetic analysis of the rumen bacterial community in steers.
Myer PR; Kim M; Freetly HC; Smith TPL
J Microbiol Methods; 2016 Aug; 127():132-140. PubMed ID: 27282101
[TBL] [Abstract][Full Text] [Related]
3. Novel and unexpected prokaryotic diversity in water and sediments of the alkaline, hypersaline lakes of the Wadi An Natrun, Egypt.
Mesbah NM; Abou-El-Ela SH; Wiegel J
Microb Ecol; 2007 Nov; 54(4):598-617. PubMed ID: 17450395
[TBL] [Abstract][Full Text] [Related]
4. PanFP: pangenome-based functional profiles for microbial communities.
Jun SR; Robeson MS; Hauser LJ; Schadt CW; Gorin AA
BMC Res Notes; 2015 Sep; 8():479. PubMed ID: 26409790
[TBL] [Abstract][Full Text] [Related]
5. The Aboveground Vegetation Type and Underground Soil Property Mediate the Divergence of Soil Microbiomes and the Biological Interactions.
Wu SH; Huang BH; Huang CL; Li G; Liao PC
Microb Ecol; 2018 Feb; 75(2):434-446. PubMed ID: 28765980
[TBL] [Abstract][Full Text] [Related]
6. Presence of pathogenic Escherichia coli is correlated with bacterial community diversity and composition on pre-harvest cattle hides.
Chopyk J; Moore RM; DiSpirito Z; Stromberg ZR; Lewis GL; Renter DG; Cernicchiaro N; Moxley RA; Wommack KE
Microbiome; 2016 Mar; 4():9. PubMed ID: 27000779
[TBL] [Abstract][Full Text] [Related]
7. Modified RNA-seq method for microbial community and diversity analysis using rRNA in different types of environmental samples.
Yan YW; Zou B; Zhu T; Hozzein WN; Quan ZX
PLoS One; 2017; 12(10):e0186161. PubMed ID: 29016661
[TBL] [Abstract][Full Text] [Related]
8. Different next generation sequencing platforms produce different microbial profiles and diversity in cystic fibrosis sputum.
Hahn A; Sanyal A; Perez GF; Colberg-Poley AM; Campos J; Rose MC; Pérez-Losada M
J Microbiol Methods; 2016 Nov; 130():95-99. PubMed ID: 27609714
[TBL] [Abstract][Full Text] [Related]
9. TaxAss: Leveraging a Custom Freshwater Database Achieves Fine-Scale Taxonomic Resolution.
Rohwer RR; Hamilton JJ; Newton RJ; McMahon KD
mSphere; 2018 Sep; 3(5):. PubMed ID: 30185512
[TBL] [Abstract][Full Text] [Related]
10. Correcting for 16S rRNA gene copy numbers in microbiome surveys remains an unsolved problem.
Louca S; Doebeli M; Parfrey LW
Microbiome; 2018 Feb; 6(1):41. PubMed ID: 29482646
[TBL] [Abstract][Full Text] [Related]
11. Bacterial Diversity Patterns Differ in Soils Developing in Sub-tropical and Cool-Temperate Ecosystems.
Shanmugam SG; Magbanua ZV; Williams MA; Jangid K; Whitman WB; Peterson DG; Kingery WL
Microb Ecol; 2017 Apr; 73(3):556-569. PubMed ID: 27889811
[TBL] [Abstract][Full Text] [Related]
12. Analysis of the microbiome: Advantages of whole genome shotgun versus 16S amplicon sequencing.
Ranjan R; Rani A; Metwally A; McGee HS; Perkins DL
Biochem Biophys Res Commun; 2016 Jan; 469(4):967-77. PubMed ID: 26718401
[TBL] [Abstract][Full Text] [Related]
13. A comprehensive method for amplicon-based and metagenomic characterization of viruses, bacteria, and eukaryotes in freshwater samples.
Uyaguari-Diaz MI; Chan M; Chaban BL; Croxen MA; Finke JF; Hill JE; Peabody MA; Van Rossum T; Suttle CA; Brinkman FS; Isaac-Renton J; Prystajecky NA; Tang P
Microbiome; 2016 Jul; 4(1):20. PubMed ID: 27391119
[TBL] [Abstract][Full Text] [Related]
14. Using 16S rRNA gene as marker to detect unknown bacteria in microbial communities.
Tran Q; Pham DT; Phan V
BMC Bioinformatics; 2017 Dec; 18(Suppl 14):499. PubMed ID: 29297282
[TBL] [Abstract][Full Text] [Related]
15. Threatened corals provide underexplored microbial habitats.
Sunagawa S; Woodley CM; Medina M
PLoS One; 2010 Mar; 5(3):e9554. PubMed ID: 20221265
[TBL] [Abstract][Full Text] [Related]
16. A comprehensive evaluation of the sl1p pipeline for 16S rRNA gene sequencing analysis.
Whelan FJ; Surette MG
Microbiome; 2017 Aug; 5(1):100. PubMed ID: 28807046
[TBL] [Abstract][Full Text] [Related]
17. Phylogeny-based classification of microbial communities.
Tanaseichuk O; Borneman J; Jiang T
Bioinformatics; 2014 Feb; 30(4):449-56. PubMed ID: 24369151
[TBL] [Abstract][Full Text] [Related]
18. Multiple copies of 16s rRNA gene affect the restriction patterns and DGGE profile as revealed by analysis of genome database.
Kang YJ; Cheng J; Mei LJ; Hu J; Piao Z; Yin SX
Mikrobiologiia; 2010; 79(5):664-71. PubMed ID: 21090508
[TBL] [Abstract][Full Text] [Related]
19. FoodMicrobionet: A database for the visualisation and exploration of food bacterial communities based on network analysis.
Parente E; Cocolin L; De Filippis F; Zotta T; Ferrocino I; O'Sullivan O; Neviani E; De Angelis M; Cotter PD; Ercolini D
Int J Food Microbiol; 2016 Feb; 219():28-37. PubMed ID: 26704067
[TBL] [Abstract][Full Text] [Related]
20. MCaVoH: A toolkit for mining, classification and visualization of human microbiota.
Nisar M; Noureen N; Fazal S; Qadir MA
J Microbiol Methods; 2015 Oct; 117():28-35. PubMed ID: 26193336
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
