These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

147 related articles for article (PubMed ID: 26458889)

  • 1. A multi-objective optimization approach accurately resolves protein domain architectures.
    Bernardes JS; Vieira FR; Zaverucha G; Carbone A
    Bioinformatics; 2016 Feb; 32(3):345-53. PubMed ID: 26458889
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Improvement in Protein Domain Identification Is Reached by Breaking Consensus, with the Agreement of Many Profiles and Domain Co-occurrence.
    Bernardes J; Zaverucha G; Vaquero C; Carbone A
    PLoS Comput Biol; 2016 Jul; 12(7):e1005038. PubMed ID: 27472895
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A fast and automated solution for accurately resolving protein domain architectures.
    Yeats C; Redfern OC; Orengo C
    Bioinformatics; 2010 Mar; 26(6):745-51. PubMed ID: 20118117
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Plasmobase: a comparative database of predicted domain architectures for Plasmodium genomes.
    Bernardes J; Vaquero C; Carbone A
    Malar J; 2017 Jun; 16(1):241. PubMed ID: 28592293
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MyCLADE: a multi-source domain annotation server for sequence functional exploration.
    Vicedomini R; Blachon C; Oteri F; Carbone A
    Nucleic Acids Res; 2021 Jul; 49(W1):W452-W458. PubMed ID: 34023906
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Improving pairwise comparison of protein sequences with domain co-occurrence.
    Menichelli C; Gascuel O; Bréhélin L
    PLoS Comput Biol; 2018 Jan; 14(1):e1005889. PubMed ID: 29293498
    [TBL] [Abstract][Full Text] [Related]  

  • 7. AIDA: ab initio domain assembly for automated multi-domain protein structure prediction and domain-domain interaction prediction.
    Xu D; Jaroszewski L; Li Z; Godzik A
    Bioinformatics; 2015 Jul; 31(13):2098-105. PubMed ID: 25701568
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Functional classification of CATH superfamilies: a domain-based approach for protein function annotation.
    Das S; Lee D; Sillitoe I; Dawson NL; Lees JG; Orengo CA
    Bioinformatics; 2015 Nov; 31(21):3460-7. PubMed ID: 26139634
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Protein-protein interaction specificity is captured by contact preferences and interface composition.
    Nadalin F; Carbone A
    Bioinformatics; 2018 Feb; 34(3):459-468. PubMed ID: 29028884
    [TBL] [Abstract][Full Text] [Related]  

  • 10. OrthoInspector 2.0: Software and database updates.
    Linard B; Allot A; Schneider R; Morel C; Ripp R; Bigler M; Thompson JD; Poch O; Lecompte O
    Bioinformatics; 2015 Feb; 31(3):447-8. PubMed ID: 25273105
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Detection of new protein domains using co-occurrence: application to Plasmodium falciparum.
    Terrapon N; Gascuel O; Maréchal E; Bréehélin L
    Bioinformatics; 2009 Dec; 25(23):3077-83. PubMed ID: 19786484
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Identification of hidden relationships from the coupling of hydrophobic cluster analysis and domain architecture information.
    Faure G; Callebaut I
    Bioinformatics; 2013 Jul; 29(14):1726-33. PubMed ID: 23677940
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Using context to improve protein domain identification.
    Ochoa A; Llinás M; Singh M
    BMC Bioinformatics; 2011 Mar; 12():90. PubMed ID: 21453511
    [TBL] [Abstract][Full Text] [Related]  

  • 14. ORCAN-a web-based meta-server for real-time detection and functional annotation of orthologs.
    Zielezinski A; Dziubek M; Sliski J; Karlowski WM
    Bioinformatics; 2017 Apr; 33(8):1224-1226. PubMed ID: 28057683
    [TBL] [Abstract][Full Text] [Related]  

  • 15. cath-resolve-hits: a new tool that resolves domain matches suspiciously quickly.
    Lewis TE; Sillitoe I; Lees JG
    Bioinformatics; 2019 May; 35(10):1766-1767. PubMed ID: 30295745
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Targeted domain assembly for fast functional profiling of metagenomic datasets with S3A.
    David L; Vicedomini R; Richard H; Carbone A
    Bioinformatics; 2020 Jul; 36(13):3975-3981. PubMed ID: 32330240
    [TBL] [Abstract][Full Text] [Related]  

  • 17. SSEP-Domain: protein domain prediction by alignment of secondary structure elements and profiles.
    Gewehr JE; Zimmer R
    Bioinformatics; 2006 Jan; 22(2):181-7. PubMed ID: 16267083
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Improving protein fold recognition with hybrid profiles combining sequence and structure evolution.
    Ghouzam Y; Postic G; de Brevern AG; Gelly JC
    Bioinformatics; 2015 Dec; 31(23):3782-9. PubMed ID: 26254434
    [TBL] [Abstract][Full Text] [Related]  

  • 19. DOMAC: an accurate, hybrid protein domain prediction server.
    Cheng J
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W354-6. PubMed ID: 17553833
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Putracer: a novel method for identification of continuous-domains in multi-domain proteins.
    Arab SS; Gharamaleki MP; Pashandi Z; Mobasseri R
    J Bioinform Comput Biol; 2013 Feb; 11(1):1340012. PubMed ID: 23427994
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.