1193 related articles for article (PubMed ID: 26463379)
1. Studying Isoform-Specific mRNA Recruitment to Polyribosomes with Frac-seq.
Martinez-Nunez RT; Sanford JR
Methods Mol Biol; 2016; 1358():99-108. PubMed ID: 26463379
[TBL] [Abstract][Full Text] [Related]
2. Frac-seq reveals isoform-specific recruitment to polyribosomes.
Sterne-Weiler T; Martinez-Nunez RT; Howard JM; Cvitovik I; Katzman S; Tariq MA; Pourmand N; Sanford JR
Genome Res; 2013 Oct; 23(10):1615-23. PubMed ID: 23783272
[TBL] [Abstract][Full Text] [Related]
3. Genome-Wide Posttranscriptional Dysregulation by MicroRNAs in Human Asthma as Revealed by Frac-seq.
Martinez-Nunez RT; Rupani H; Platé M; Niranjan M; Chambers RC; Howarth PH; Sanchez-Elsner T
J Immunol; 2018 Jul; 201(1):251-263. PubMed ID: 29769273
[TBL] [Abstract][Full Text] [Related]
4. Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data.
Bai Y; Kinne J; Donham B; Jiang F; Ding L; Hassler JR; Kaufman RJ
BMC Genomics; 2016 Aug; 17 Suppl 7(Suppl 7):503. PubMed ID: 27556805
[TBL] [Abstract][Full Text] [Related]
5. Mapping the Transcriptome-Wide Landscape of RBP Binding Sites Using gPAR-CLIP-seq: Bioinformatic Analysis.
Freeberg MA; Kim JK
Methods Mol Biol; 2016; 1361():91-104. PubMed ID: 26483018
[TBL] [Abstract][Full Text] [Related]
6. Global analysis of alternative splicing uncovers developmental regulation of nonsense-mediated decay in C. elegans.
Barberan-Soler S; Lambert NJ; Zahler AM
RNA; 2009 Sep; 15(9):1652-60. PubMed ID: 19617316
[TBL] [Abstract][Full Text] [Related]
7. Gene expression and splicing alterations analyzed by high throughput RNA sequencing of chronic lymphocytic leukemia specimens.
Liao W; Jordaan G; Nham P; Phan RT; Pelegrini M; Sharma S
BMC Cancer; 2015 Oct; 15():714. PubMed ID: 26474785
[TBL] [Abstract][Full Text] [Related]
8. Deep sequencing of pre-translational mRNPs reveals hidden flux through evolutionarily conserved alternative splicing nonsense-mediated decay pathways.
Kovalak C; Donovan S; Bicknell AA; Metkar M; Moore MJ
Genome Biol; 2021 May; 22(1):132. PubMed ID: 33941243
[TBL] [Abstract][Full Text] [Related]
9. Allele-Selective Transcriptome Recruitment to Polysomes Primed for Translation: Protein-Coding and Noncoding RNAs, and RNA Isoforms.
Mascarenhas R; Pietrzak M; Smith RM; Webb A; Wang D; Papp AC; Pinsonneault JK; Seweryn M; Rempala G; Sadee W
PLoS One; 2015; 10(9):e0136798. PubMed ID: 26331722
[TBL] [Abstract][Full Text] [Related]
10. Genome-wide mapping of alternative splicing in Arabidopsis thaliana.
Filichkin SA; Priest HD; Givan SA; Shen R; Bryant DW; Fox SE; Wong WK; Mockler TC
Genome Res; 2010 Jan; 20(1):45-58. PubMed ID: 19858364
[TBL] [Abstract][Full Text] [Related]
11. Polyribosomal RNA-Seq reveals the decreased complexity and diversity of the Arabidopsis translatome.
Zhang X; Rosen BD; Tang H; Krishnakumar V; Town CD
PLoS One; 2015; 10(2):e0117699. PubMed ID: 25706651
[TBL] [Abstract][Full Text] [Related]
12. Roles for transcript leaders in translation and mRNA decay revealed by transcript leader sequencing.
Arribere JA; Gilbert WV
Genome Res; 2013 Jun; 23(6):977-87. PubMed ID: 23580730
[TBL] [Abstract][Full Text] [Related]
13. Developmental and muscle-specific regulation of avian fast skeletal troponin T isoform expression by mRNA splicing.
Bucher EA; de la Brousse FC; Emerson CP
J Biol Chem; 1989 Jul; 264(21):12482-91. PubMed ID: 2745456
[TBL] [Abstract][Full Text] [Related]
14. Multiplexed primer extension sequencing: A targeted RNA-seq method that enables high-precision quantitation of mRNA splicing isoforms and rare pre-mRNA splicing intermediates.
Gildea MA; Dwyer ZW; Pleiss JA
Methods; 2020 Apr; 176():34-45. PubMed ID: 31121301
[TBL] [Abstract][Full Text] [Related]
15. Cancer-Associated Perturbations in Alternative Pre-messenger RNA Splicing.
Shkreta L; Bell B; Revil T; Venables JP; Prinos P; Elela SA; Chabot B
Cancer Treat Res; 2013; 158():41-94. PubMed ID: 24222354
[TBL] [Abstract][Full Text] [Related]
16. A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing.
Hoang NV; Furtado A; Mason PJ; Marquardt A; Kasirajan L; Thirugnanasambandam PP; Botha FC; Henry RJ
BMC Genomics; 2017 May; 18(1):395. PubMed ID: 28532419
[TBL] [Abstract][Full Text] [Related]
17. Widespread predicted nonsense-mediated mRNA decay of alternatively-spliced transcripts of human normal and disease genes.
Green RE; Lewis BP; Hillman RT; Blanchette M; Lareau LF; Garnett AT; Rio DC; Brenner SE
Bioinformatics; 2003; 19 Suppl 1():i118-21. PubMed ID: 12855447
[TBL] [Abstract][Full Text] [Related]
18. Transcriptome-wide identification of RNA binding sites by CLIP-seq.
Murigneux V; Saulière J; Roest Crollius H; Le Hir H
Methods; 2013 Sep; 63(1):32-40. PubMed ID: 23545196
[TBL] [Abstract][Full Text] [Related]
19. Quantitative Measurement of Alternatively Spliced RNA Isoform Levels.
Li ZJ; Zheng S
Methods Mol Biol; 2022; 2537():63-79. PubMed ID: 35895259
[TBL] [Abstract][Full Text] [Related]
20. Tracking Alternatively Spliced Isoforms from Long Reads by SpliceHunter.
Kuang Z; Canzar S
Methods Mol Biol; 2018; 1751():73-88. PubMed ID: 29508290
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
