204 related articles for article (PubMed ID: 26463387)
1. Identification of miRNA-Target RNA Interactions Using CLASH.
Helwak A; Tollervey D
Methods Mol Biol; 2016; 1358():229-51. PubMed ID: 26463387
[TBL] [Abstract][Full Text] [Related]
2. Mapping the miRNA interactome by cross-linking ligation and sequencing of hybrids (CLASH).
Helwak A; Tollervey D
Nat Protoc; 2014 Mar; 9(3):711-28. PubMed ID: 24577361
[TBL] [Abstract][Full Text] [Related]
3. cCLIP-Seq: Retrieval of Chimeric Reads from HITS-CLIP (CLIP-Seq) Libraries.
Alexiou P; Maragkakis M; Mourelatos Z; Vourekas A
Methods Mol Biol; 2018; 1680():87-100. PubMed ID: 29030843
[TBL] [Abstract][Full Text] [Related]
4. Learning to Predict miRNA-mRNA Interactions from AGO CLIP Sequencing and CLASH Data.
Lu Y; Leslie CS
PLoS Comput Biol; 2016 Jul; 12(7):e1005026. PubMed ID: 27438777
[TBL] [Abstract][Full Text] [Related]
5. Argonaute CLIP--a method to identify in vivo targets of miRNAs.
Jaskiewicz L; Bilen B; Hausser J; Zavolan M
Methods; 2012 Oct; 58(2):106-12. PubMed ID: 23022257
[TBL] [Abstract][Full Text] [Related]
6. High-throughput sequencing of RNAs isolated by cross-linking immunoprecipitation (HITS-CLIP) reveals Argonaute-associated microRNAs and targets in Schistosoma japonicum.
Zhao J; Luo R; Xu X; Zou Y; Zhang Q; Pan W
Parasit Vectors; 2015 Nov; 8():589. PubMed ID: 26577460
[TBL] [Abstract][Full Text] [Related]
7. PAR-CLIP and streamlined small RNA cDNA library preparation protocol for the identification of RNA binding protein target sites.
Benhalevy D; McFarland HL; Sarshad AA; Hafner M
Methods; 2017 Apr; 118-119():41-49. PubMed ID: 27871973
[TBL] [Abstract][Full Text] [Related]
8. Immunoprecipitation and High-Throughput Sequencing of ARGONAUTE-Bound Target RNAs from Plants.
Carbonell A
Methods Mol Biol; 2017; 1640():93-112. PubMed ID: 28608336
[TBL] [Abstract][Full Text] [Related]
9. Using hiCLIP to identify RNA duplexes that interact with a specific RNA-binding protein.
Sugimoto Y; Chakrabarti AM; Luscombe NM; Ule J
Nat Protoc; 2017 Mar; 12(3):611-637. PubMed ID: 28230851
[TBL] [Abstract][Full Text] [Related]
10. Identify MicroRNA Targets Using AGO2-CLASH (Cross-linking, Ligation, and Sequencing of Hybrids) and AGO2-CLIP (Cross-Linking and Immuno-Precipitation) in Cells with or Without the MicroRNA of Interest Depleted.
Kato M
Methods Mol Biol; 2023; 2666():137-147. PubMed ID: 37166662
[TBL] [Abstract][Full Text] [Related]
11. Discovering circRNA-microRNA Interactions from CLIP-Seq Data.
Zhang XQ; Yang JH
Methods Mol Biol; 2018; 1724():193-207. PubMed ID: 29322451
[TBL] [Abstract][Full Text] [Related]
12. Identifying miRNA Targets Using AGO-RIPseq.
Petri R; Jakobsson J
Methods Mol Biol; 2018; 1720():131-140. PubMed ID: 29236255
[TBL] [Abstract][Full Text] [Related]
13. Cross-linking and immunoprecipitation of nuclear RNA-binding proteins.
Li Q; Uemura Y; Kawahara Y
Methods Mol Biol; 2015; 1262():247-63. PubMed ID: 25555586
[TBL] [Abstract][Full Text] [Related]
14. Unambiguous identification of miRNA:target site interactions by different types of ligation reactions.
Grosswendt S; Filipchyk A; Manzano M; Klironomos F; Schilling M; Herzog M; Gottwein E; Rajewsky N
Mol Cell; 2014 Jun; 54(6):1042-1054. PubMed ID: 24857550
[TBL] [Abstract][Full Text] [Related]
15. Improving miRNA Target Prediction Using CLASH Data.
Li X; Hu H
Methods Mol Biol; 2019; 1970():75-83. PubMed ID: 30963489
[TBL] [Abstract][Full Text] [Related]
16. PAR-CLIP for Discovering Target Sites of RNA-Binding Proteins.
Garzia A; Morozov P; Sajek M; Meyer C; Tuschl T
Methods Mol Biol; 2018; 1720():55-75. PubMed ID: 29236251
[TBL] [Abstract][Full Text] [Related]
17. Modified Cross-Linking, Ligation, and Sequencing of Hybrids (qCLASH) to Identify MicroRNA Targets.
Gay LA; Turner PC; Renne R
Curr Protoc; 2021 Oct; 1(10):e257. PubMed ID: 34610213
[TBL] [Abstract][Full Text] [Related]
18. Recent computational developments on CLIP-seq data analysis and microRNA targeting implications.
Bottini S; Pratella D; Grandjean V; Repetto E; Trabucchi M
Brief Bioinform; 2018 Nov; 19(6):1290-1301. PubMed ID: 28605404
[TBL] [Abstract][Full Text] [Related]
19. Seq and CLIP through the miRNA world.
Mittal N; Zavolan M
Genome Biol; 2014 Jan; 15(1):202. PubMed ID: 24460822
[TBL] [Abstract][Full Text] [Related]
20. A Pipeline for PAR-CLIP Data Analysis.
Jens M
Methods Mol Biol; 2016; 1358():197-207. PubMed ID: 26463385
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
