These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

119 related articles for article (PubMed ID: 26523925)

  • 1. AmpliconDuo: A Split-Sample Filtering Protocol for High-Throughput Amplicon Sequencing of Microbial Communities.
    Lange A; Jost S; Heider D; Bock C; Budeus B; Schilling E; Strittmatter A; Boenigk J; Hoffmann D
    PLoS One; 2015; 10(11):e0141590. PubMed ID: 26523925
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Evaluation of the reproducibility of amplicon sequencing with Illumina MiSeq platform.
    Wen C; Wu L; Qin Y; Van Nostrand JD; Ning D; Sun B; Xue K; Liu F; Deng Y; Liang Y; Zhou J
    PLoS One; 2017; 12(4):e0176716. PubMed ID: 28453559
    [TBL] [Abstract][Full Text] [Related]  

  • 3. High-throughput amplicon sequencing of the full-length 16S rRNA gene with single-nucleotide resolution.
    Callahan BJ; Wong J; Heiner C; Oh S; Theriot CM; Gulati AS; McGill SK; Dougherty MK
    Nucleic Acids Res; 2019 Oct; 47(18):e103. PubMed ID: 31269198
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Clustering of circular consensus sequences: accurate error correction and assembly of single molecule real-time reads from multiplexed amplicon libraries.
    Francis F; Dumas MD; Davis SB; Wisser RJ
    BMC Bioinformatics; 2018 Aug; 19(1):302. PubMed ID: 30126356
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A novel conceptual approach to read-filtering in high-throughput amplicon sequencing studies.
    Puente-Sánchez F; Aguirre J; Parro V
    Nucleic Acids Res; 2016 Feb; 44(4):e40. PubMed ID: 26553806
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Minor variant detection in amplicons using 454 massive parallel pyrosequencing: experiences and considerations for successful applications.
    Vandenbroucke I; Van Marck H; Verhasselt P; Thys K; Mostmans W; Dumont S; Van Eygen V; Coen K; Tuefferd M; Aerssens J
    Biotechniques; 2011 Sep; 51(3):167-77. PubMed ID: 21906038
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Effect of k-tuple length on sample-comparison with high-throughput sequencing data.
    Wang Y; Lei X; Wang S; Wang Z; Song N; Zeng F; Chen T
    Biochem Biophys Res Commun; 2016 Jan; 469(4):1021-7. PubMed ID: 26721429
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies.
    Brooks JP; Edwards DJ; Harwich MD; Rivera MC; Fettweis JM; Serrano MG; Reris RA; Sheth NU; Huang B; Girerd P; ; Strauss JF; Jefferson KK; Buck GA
    BMC Microbiol; 2015 Mar; 15():66. PubMed ID: 25880246
    [TBL] [Abstract][Full Text] [Related]  

  • 9. An improved high throughput sequencing method for studying oomycete communities.
    Sapkota R; Nicolaisen M
    J Microbiol Methods; 2015 Mar; 110():33-9. PubMed ID: 25602160
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Evaluation of next generation sequencing for the analysis of Eimeria communities in wildlife.
    Vermeulen ET; Lott MJ; Eldridge MD; Power ML
    J Microbiol Methods; 2016 May; 124():1-9. PubMed ID: 26944624
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A novel method to determine the minimum number of sequences required for reliable microbial community analysis.
    Ni J; Li X; He Z; Xu M
    J Microbiol Methods; 2017 Aug; 139():196-201. PubMed ID: 28602755
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Integrating high-throughput pyrosequencing and quantitative real-time PCR to analyze complex microbial communities.
    Zhang H; Parameswaran P; Badalamenti J; Rittmann BE; Krajmalnik-Brown R
    Methods Mol Biol; 2011; 733():107-28. PubMed ID: 21431766
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Primer ID Validates Template Sampling Depth and Greatly Reduces the Error Rate of Next-Generation Sequencing of HIV-1 Genomic RNA Populations.
    Zhou S; Jones C; Mieczkowski P; Swanstrom R
    J Virol; 2015 Aug; 89(16):8540-55. PubMed ID: 26041299
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis.
    Wu L; Wen C; Qin Y; Yin H; Tu Q; Van Nostrand JD; Yuan T; Yuan M; Deng Y; Zhou J
    BMC Microbiol; 2015 Jun; 15():125. PubMed ID: 26084274
    [TBL] [Abstract][Full Text] [Related]  

  • 15. An extended single-index multiplexed 16S rRNA sequencing for microbial community analysis on MiSeq illumina platforms.
    Derakhshani H; Tun HM; Khafipour E
    J Basic Microbiol; 2016 Mar; 56(3):321-6. PubMed ID: 26426811
    [TBL] [Abstract][Full Text] [Related]  

  • 16. High-Throughput Sequencing-The Key to Rapid Biodiversity Assessment of Marine Metazoa?
    Mohrbeck I; Raupach MJ; Martínez Arbizu P; Knebelsberger T; Laakmann S
    PLoS One; 2015; 10(10):e0140342. PubMed ID: 26479071
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Pipeline for amplifying and analyzing amplicons of the V1-V3 region of the 16S rRNA gene.
    Allen HK; Bayles DO; Looft T; Trachsel J; Bass BE; Alt DP; Bearson SM; Nicholson T; Casey TA
    BMC Res Notes; 2016 Aug; 9():380. PubMed ID: 27485508
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Next-generation sequencing can reveal in vitro-generated PCR crossover products: some artifactual sequences correspond to HLA alleles in the IMGT/HLA database.
    Holcomb CL; Rastrou M; Williams TC; Goodridge D; Lazaro AM; Tilanus M; Erlich HA
    Tissue Antigens; 2014 Jan; 83(1):32-40. PubMed ID: 24355006
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Assessment of a 16S rRNA amplicon Illumina sequencing procedure for studying the microbiome of a symbiont-rich aphid genus.
    Jousselin E; Clamens AL; Galan M; Bernard M; Maman S; Gschloessl B; Duport G; Meseguer AS; Calevro F; Coeur d'acier A
    Mol Ecol Resour; 2016 May; 16(3):628-40. PubMed ID: 26458227
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Accurate multiplexing and filtering for high-throughput amplicon-sequencing.
    Esling P; Lejzerowicz F; Pawlowski J
    Nucleic Acids Res; 2015 Mar; 43(5):2513-24. PubMed ID: 25690897
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.