191 related articles for article (PubMed ID: 26553456)
1. RNA sequencing of Sleeping Beauty transposon-induced tumors detects transposon-RNA fusions in forward genetic cancer screens.
Temiz NA; Moriarity BS; Wolf NK; Riordan JD; Dupuy AJ; Largaespada DA; Sarver AL
Genome Res; 2016 Jan; 26(1):119-29. PubMed ID: 26553456
[TBL] [Abstract][Full Text] [Related]
2. Identification of Cancer Genes Based on De Novo Transposon Insertion Site Analysis Using RNA and DNA Sequencing.
Sarver A
Methods Mol Biol; 2019; 1907():73-79. PubMed ID: 30542991
[TBL] [Abstract][Full Text] [Related]
3. Identification of Sleeping Beauty transposon insertions in solid tumors using linker-mediated PCR.
Janik CL; Starr TK
J Vis Exp; 2013 Feb; (72):e50156. PubMed ID: 23407503
[TBL] [Abstract][Full Text] [Related]
4. TAPDANCE: an automated tool to identify and annotate transposon insertion CISs and associations between CISs from next generation sequence data.
Sarver AL; Erdman J; Starr T; Largaespada DA; Silverstein KA
BMC Bioinformatics; 2012 Jun; 13():154. PubMed ID: 22748055
[TBL] [Abstract][Full Text] [Related]
5. Sequencing methods and datasets to improve functional interpretation of sleeping beauty mutagenesis screens.
Riordan JD; Drury LJ; Smith RP; Brett BT; Rogers LM; Scheetz TE; Dupuy AJ
BMC Genomics; 2014 Dec; 15(1):1150. PubMed ID: 25526783
[TBL] [Abstract][Full Text] [Related]
6. Somatic mutagenesis with a Sleeping Beauty transposon system leads to solid tumor formation in zebrafish.
McGrail M; Hatler JM; Kuang X; Liao HK; Nannapaneni K; Watt KE; Uhl JD; Largaespada DA; Vollbrecht E; Scheetz TE; Dupuy AJ; Hostetter JM; Essner JJ
PLoS One; 2011 Apr; 6(4):e18826. PubMed ID: 21533036
[TBL] [Abstract][Full Text] [Related]
7. Identification of cancer driver genes using Sleeping Beauty transposon mutagenesis.
Takeda H; Jenkins NA; Copeland NG
Cancer Sci; 2021 Jun; 112(6):2089-2096. PubMed ID: 33783919
[TBL] [Abstract][Full Text] [Related]
8. SB Digestor: a tailored driver gene identification tool for dissecting heterogeneous Sleeping Beauty transposon-induced tumors.
Zhang A; Wang L; Lei JH; Miao Z; Valecha MV; Hu P; Miao K; Deng CX
Int J Biol Sci; 2023; 19(6):1764-1777. PubMed ID: 37063417
[TBL] [Abstract][Full Text] [Related]
9. Identifying transposon insertions and their effects from RNA-sequencing data.
de Ruiter JR; Kas SM; Schut E; Adams DJ; Koudijs MJ; Wessels LFA; Jonkers J
Nucleic Acids Res; 2017 Jul; 45(12):7064-7077. PubMed ID: 28575524
[TBL] [Abstract][Full Text] [Related]
10. Ex Vivo Transposon-Mediated Genetic Screens for Cancer Gene Discovery.
O'Donnell KA; Guo Y; Suresh S; Updegraff BL; Zhou X
Methods Mol Biol; 2019; 1907():145-157. PubMed ID: 30542998
[TBL] [Abstract][Full Text] [Related]
11. A Sleeping Beauty transposon-mediated screen identifies murine susceptibility genes for adenomatous polyposis coli (Apc)-dependent intestinal tumorigenesis.
Starr TK; Scott PM; Marsh BM; Zhao L; Than BL; O'Sullivan MG; Sarver AL; Dupuy AJ; Largaespada DA; Cormier RT
Proc Natl Acad Sci U S A; 2011 Apr; 108(14):5765-70. PubMed ID: 21436051
[TBL] [Abstract][Full Text] [Related]
12. Genetic signature of histiocytic sarcoma revealed by a sleeping beauty transposon genetic screen in mice.
Been RA; Linden MA; Hager CJ; DeCoursin KJ; Abrahante JE; Landman SR; Steinbach M; Sarver AL; Largaespada DA; Starr TK
PLoS One; 2014; 9(5):e97280. PubMed ID: 24827933
[TBL] [Abstract][Full Text] [Related]
13. MTID: a database of Sleeping Beauty transposon insertions in mice.
Roberg-Perez K; Carlson CM; Largaespada DA
Nucleic Acids Res; 2003 Jan; 31(1):78-81. PubMed ID: 12519952
[TBL] [Abstract][Full Text] [Related]
14. Advances in functional genetic screening with transposons and CRISPR/Cas9 to illuminate cancer biology.
O'Donnell KA
Curr Opin Genet Dev; 2018 Apr; 49():85-94. PubMed ID: 29587177
[TBL] [Abstract][Full Text] [Related]
15. Cancer gene discovery in solid tumours using transposon-based somatic mutagenesis in the mouse.
Collier LS; Carlson CM; Ravimohan S; Dupuy AJ; Largaespada DA
Nature; 2005 Jul; 436(7048):272-6. PubMed ID: 16015333
[TBL] [Abstract][Full Text] [Related]
16. Transposon-mediated mutagenesis of somatic cells in the mouse for cancer gene identification.
Largaespada DA
Methods; 2009 Nov; 49(3):282-6. PubMed ID: 19607923
[TBL] [Abstract][Full Text] [Related]
17. Sleeping Beauty transposon insertional mutagenesis based mouse models for cancer gene discovery.
Moriarity BS; Largaespada DA
Curr Opin Genet Dev; 2015 Feb; 30():66-72. PubMed ID: 26051241
[TBL] [Abstract][Full Text] [Related]
18. PiggyBac transposon mutagenesis: a tool for cancer gene discovery in mice.
Rad R; Rad L; Wang W; Cadinanos J; Vassiliou G; Rice S; Campos LS; Yusa K; Banerjee R; Li MA; de la Rosa J; Strong A; Lu D; Ellis P; Conte N; Yang FT; Liu P; Bradley A
Science; 2010 Nov; 330(6007):1104-7. PubMed ID: 20947725
[TBL] [Abstract][Full Text] [Related]
19. Transposon-based screens for cancer gene discovery in mouse models.
Dupuy AJ
Semin Cancer Biol; 2010 Aug; 20(4):261-8. PubMed ID: 20478384
[TBL] [Abstract][Full Text] [Related]
20. Detecting statistically significant common insertion sites in retroviral insertional mutagenesis screens.
de Ridder J; Uren A; Kool J; Reinders M; Wessels L
PLoS Comput Biol; 2006 Dec; 2(12):e166. PubMed ID: 17154714
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]