362 related articles for article (PubMed ID: 26568634)
1. TCGA2STAT: simple TCGA data access for integrated statistical analysis in R.
Wan YW; Allen GI; Liu Z
Bioinformatics; 2016 Mar; 32(6):952-4. PubMed ID: 26568634
[TBL] [Abstract][Full Text] [Related]
2. TCGA-assembler 2: software pipeline for retrieval and processing of TCGA/CPTAC data.
Wei L; Jin Z; Yang S; Xu Y; Zhu Y; Ji Y
Bioinformatics; 2018 May; 34(9):1615-1617. PubMed ID: 29272348
[TBL] [Abstract][Full Text] [Related]
3. Exploring drivers of gene expression in the Cancer Genome Atlas.
Rau A; Flister M; Rui H; Auer PL
Bioinformatics; 2019 Jan; 35(1):62-68. PubMed ID: 30561551
[TBL] [Abstract][Full Text] [Related]
4. cit: hypothesis testing software for mediation analysis in genomic applications.
Millstein J; Chen GK; Breton CV
Bioinformatics; 2016 Aug; 32(15):2364-5. PubMed ID: 27153715
[TBL] [Abstract][Full Text] [Related]
5. synbreed: a framework for the analysis of genomic prediction data using R.
Wimmer V; Albrecht T; Auinger HJ; Schön CC
Bioinformatics; 2012 Aug; 28(15):2086-7. PubMed ID: 22689388
[TBL] [Abstract][Full Text] [Related]
6. DNAshapeR: an R/Bioconductor package for DNA shape prediction and feature encoding.
Chiu TP; Comoglio F; Zhou T; Yang L; Paro R; Rohs R
Bioinformatics; 2016 Apr; 32(8):1211-3. PubMed ID: 26668005
[TBL] [Abstract][Full Text] [Related]
7. compendiumdb: an R package for retrieval and storage of functional genomics data.
Nandal UK; van Kampen AH; Moerland PD
Bioinformatics; 2016 Sep; 32(18):2856-7. PubMed ID: 27323392
[TBL] [Abstract][Full Text] [Related]
8. IntegratedMRF: random forest-based framework for integrating prediction from different data types.
Rahman R; Otridge J; Pal R
Bioinformatics; 2017 May; 33(9):1407-1410. PubMed ID: 28334269
[TBL] [Abstract][Full Text] [Related]
9. myTAI: evolutionary transcriptomics with R.
Drost HG; Gabel A; Liu J; Quint M; Grosse I
Bioinformatics; 2018 May; 34(9):1589-1590. PubMed ID: 29309527
[TBL] [Abstract][Full Text] [Related]
10. R.JIVE for exploration of multi-source molecular data.
O'Connell MJ; Lock EF
Bioinformatics; 2016 Sep; 32(18):2877-9. PubMed ID: 27273669
[TBL] [Abstract][Full Text] [Related]
11. Web-TCGA: an online platform for integrated analysis of molecular cancer data sets.
Deng M; Brägelmann J; Schultze JL; Perner S
BMC Bioinformatics; 2016 Feb; 17():72. PubMed ID: 26852330
[TBL] [Abstract][Full Text] [Related]
12. Sstack: an R package for stacking with applications to scenarios involving sequential addition of samples and features.
Matlock K; Rahman R; Ghosh S; Pal R
Bioinformatics; 2019 Sep; 35(17):3143-3145. PubMed ID: 30649230
[TBL] [Abstract][Full Text] [Related]
13. DiNAMIC.Duo: detecting somatic DNA copy number differences without a normal reference.
Walter V; Choi HY; Zhao X; Gao Y; Holt J; Hayes DN
Bioinformatics; 2022 Sep; 38(18):4415-4417. PubMed ID: 35924981
[TBL] [Abstract][Full Text] [Related]
14. Spathial: an R package for the evolutionary analysis of biological data.
Gardini E; Giorgi FM; Decherchi S; Cavalli A
Bioinformatics; 2020 Nov; 36(17):4664-4667. PubMed ID: 32437522
[TBL] [Abstract][Full Text] [Related]
15. UCSCXenaShiny: an R/CRAN package for interactive analysis of UCSC Xena data.
Wang S; Xiong Y; Zhao L; Gu K; Li Y; Zhao F; Li J; Wang M; Wang H; Tao Z; Wu T; Zheng Y; Li X; Liu XS
Bioinformatics; 2022 Jan; 38(2):527-529. PubMed ID: 34323947
[TBL] [Abstract][Full Text] [Related]
16. Omics Pipe: a community-based framework for reproducible multi-omics data analysis.
Fisch KM; Meißner T; Gioia L; Ducom JC; Carland TM; Loguercio S; Su AI
Bioinformatics; 2015 Jun; 31(11):1724-8. PubMed ID: 25637560
[TBL] [Abstract][Full Text] [Related]
17. PINSPlus: a tool for tumor subtype discovery in integrated genomic data.
Nguyen H; Shrestha S; Draghici S; Nguyen T
Bioinformatics; 2019 Aug; 35(16):2843-2846. PubMed ID: 30590381
[TBL] [Abstract][Full Text] [Related]
18. Rediscover: an R package to identify mutually exclusive mutations.
Ferrer-Bonsoms JA; Jareno L; Rubio A
Bioinformatics; 2022 Jan; 38(3):844-845. PubMed ID: 34664620
[TBL] [Abstract][Full Text] [Related]
19. heatmaply: an R package for creating interactive cluster heatmaps for online publishing.
Galili T; O'Callaghan A; Sidi J; Sievert C
Bioinformatics; 2018 May; 34(9):1600-1602. PubMed ID: 29069305
[TBL] [Abstract][Full Text] [Related]
20. VegaMC: a R/bioconductor package for fast downstream analysis of large array comparative genomic hybridization datasets.
Morganella S; Ceccarelli M
Bioinformatics; 2012 Oct; 28(19):2512-4. PubMed ID: 22815357
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
