These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Factorial hidden Markov models and the generalized backfitting algorithm. Jacobs RA; Jiang W; Tanner MA Neural Comput; 2002 Oct; 14(10):2415-37. PubMed ID: 12396569 [TBL] [Abstract][Full Text] [Related]
3. Discriminating between rate heterogeneity and interspecific recombination in DNA sequence alignments with phylogenetic factorial hidden Markov models. Husmeier D Bioinformatics; 2005 Sep; 21 Suppl 2():ii166-72. PubMed ID: 16204097 [TBL] [Abstract][Full Text] [Related]
4. FactorialHMM: fast and exact inference in factorial hidden Markov models. Schweiger R; Erlich Y; Carmi S Bioinformatics; 2019 Jun; 35(12):2162-2164. PubMed ID: 30445428 [TBL] [Abstract][Full Text] [Related]
5. The infinite hidden Markov random field model. Chatzis SP; Tsechpenakis G IEEE Trans Neural Netw; 2010 Jun; 21(6):1004-14. PubMed ID: 20442047 [TBL] [Abstract][Full Text] [Related]
6. Variational Beta Process Hidden Markov Models with Shared Hidden States for Trajectory Recognition. Zhao J; Zhang Y; Sun S; Dai H Entropy (Basel); 2021 Sep; 23(10):. PubMed ID: 34682013 [TBL] [Abstract][Full Text] [Related]
7. Bayesian restoration of a hidden Markov chain with applications to DNA sequencing. Churchill GA; Lazareva B J Comput Biol; 1999; 6(2):261-77. PubMed ID: 10421527 [TBL] [Abstract][Full Text] [Related]
8. Training HMM structure with genetic algorithm for biological sequence analysis. Won KJ; Prügel-Bennett A; Krogh A Bioinformatics; 2004 Dec; 20(18):3613-9. PubMed ID: 15297297 [TBL] [Abstract][Full Text] [Related]
10. Multitaper Infinite Hidden Markov Model for EEG. Song AH; Chlon L; Soulat H; Tauber J; Subramanian S; Ba D; Prerau MJ Annu Int Conf IEEE Eng Med Biol Soc; 2019 Jul; 2019():5803-5807. PubMed ID: 31947171 [TBL] [Abstract][Full Text] [Related]
11. Scalable Bayesian Inference for Coupled Hidden Markov and Semi-Markov Models. Touloupou P; Finkenstädt B; Spencer SEF J Comput Graph Stat; 2020; 29(2):238-249. PubMed ID: 32939192 [TBL] [Abstract][Full Text] [Related]
12. Variational Infinite Hidden Conditional Random Fields. Bousmalis K; Zafeiriou S; Morency LP; Pantic M; Ghahramani Z IEEE Trans Pattern Anal Mach Intell; 2015 Sep; 37(9):1917-29. PubMed ID: 26353136 [TBL] [Abstract][Full Text] [Related]
13. A 9-state hidden Markov model using protein secondary structure information for protein fold recognition. Lee SY; Lee JY; Jung KS; Ryu KH Comput Biol Med; 2009 Jun; 39(6):527-34. PubMed ID: 19394594 [TBL] [Abstract][Full Text] [Related]
14. Identifying the Recurrence of Sleep Apnea Using A Harmonic Hidden Markov Model. Hadj-Amar B; Finkenstädt B; Fiecas M; Huckstepp R Ann Appl Stat; 2021 Sep; 15(3):1171-1193. PubMed ID: 34616500 [TBL] [Abstract][Full Text] [Related]
15. A heuristic Bayesian method for segmenting DNA sequence alignments and detecting evidence for recombination and gene conversion. Kedzierska A; Husmeier D Stat Appl Genet Mol Biol; 2006; 5():Article27. PubMed ID: 17140392 [TBL] [Abstract][Full Text] [Related]
16. Infinite hidden Markov models for unusual-event detection in video. Pruteanu-Malinici I; Carin L IEEE Trans Image Process; 2008 May; 17(5):811-22. PubMed ID: 18390385 [TBL] [Abstract][Full Text] [Related]
17. Enhancing the quality of phylogenetic analysis using fuzzy hidden Markov model alignments. Collyda C; Diplaris S; Mitkas P; Maglaveras N; Pappas C Stud Health Technol Inform; 2007; 129(Pt 2):1245-9. PubMed ID: 17911914 [TBL] [Abstract][Full Text] [Related]
18. Statistical Inference in Hidden Markov Models Using Titsias MK; Holmes CC; Yau C J Am Stat Assoc; 2016 Jan; 111(513):200-215. PubMed ID: 27226674 [TBL] [Abstract][Full Text] [Related]
19. ICON: An Adaptation of Infinite HMMs for Time Traces with Drift. Sgouralis I; Pressé S Biophys J; 2017 May; 112(10):2117-2126. PubMed ID: 28538149 [TBL] [Abstract][Full Text] [Related]
20. An Introduction to Infinite HMMs for Single-Molecule Data Analysis. Sgouralis I; Pressé S Biophys J; 2017 May; 112(10):2021-2029. PubMed ID: 28538142 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]