BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

83 related articles for article (PubMed ID: 26583219)

  • 1. Nucleic Acid Quadruplexes Based on 8-Halo-9-deazaxanthines: Energetics and Noncovalent Interactions in Quadruplex Stems.
    Yurenko YP; Novotný J; Mitoraj MP; Sklenář V; Michalak A; Marek R
    J Chem Theory Comput; 2014 Dec; 10(12):5353-65. PubMed ID: 26583219
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Exploring non-covalent interactions in guanine- and xanthine-based model DNA quadruplex structures: a comprehensive quantum chemical approach.
    Yurenko YP; Novotný J; Sklenář V; Marek R
    Phys Chem Chem Phys; 2014 Feb; 16(5):2072-84. PubMed ID: 24343126
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Designing a New Class of Bases for Nucleic Acid Quadruplexes and Quadruplex-Active Ligands.
    Bazzi S; Novotný J; Yurenko YP; Marek R
    Chemistry; 2015 Jun; 21(26):9414-25. PubMed ID: 26032561
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Tailoring the properties of quadruplex nucleobases for biological and nanomaterial applications.
    Novotný J; Yurenko YP; Kulhánek P; Marek R
    Phys Chem Chem Phys; 2014 Aug; 16(29):15241-8. PubMed ID: 24939211
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Weak Supramolecular Interactions Governing Parallel and Antiparallel DNA Quadruplexes: Insights from Large-Scale Quantum Mechanics Analysis of Experimentally Derived Models.
    Yurenko YP; Novotný J; Marek R
    Chemistry; 2017 Apr; 23(23):5573-5584. PubMed ID: 28225208
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A double chain reversal loop and two diagonal loops define the architecture of a unimolecular DNA quadruplex containing a pair of stacked G(syn)-G(syn)-G(anti)-G(anti) tetrads flanked by a G-(T-T) Triad and a T-T-T triple.
    Kuryavyi V; Majumdar A; Shallop A; Chernichenko N; Skripkin E; Jones R; Patel DJ
    J Mol Biol; 2001 Jun; 310(1):181-94. PubMed ID: 11419945
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Influence of base stacking geometry on the nature of excited states in G-quadruplexes: a time-dependent DFT study.
    Lech CJ; Phan AT; Michel-Beyerle ME; Voityuk AA
    J Phys Chem B; 2015 Mar; 119(9):3697-705. PubMed ID: 25654765
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A K cation-induced conformational switch within a loop spanning segment of a DNA quadruplex containing G-G-G-C repeats.
    Bouaziz S; Kettani A; Patel DJ
    J Mol Biol; 1998 Sep; 282(3):637-52. PubMed ID: 9737927
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A combined QM and MM investigation into guanine quadruplexes.
    Clay EH; Gould IR
    J Mol Graph Model; 2005 Oct; 24(2):138-46. PubMed ID: 16168688
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Modified Guanines as Constituents of Smart Ligands for Nucleic Acid Quadruplexes.
    Durec M; Zaccaria F; Fonseca Guerra C; Marek R
    Chemistry; 2016 Jul; 22(31):10912-22. PubMed ID: 27385491
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Intramolecular and intermolecular guanine quadruplexes of DNA in aqueous salt and ethanol solutions.
    Vorlícková M; Bednárová K; Kejnovská I; Kypr J
    Biopolymers; 2007 May; 86(1):1-10. PubMed ID: 17211886
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Structural diversity and extreme stability of unimolecular Oxytricha nova telomeric G-quadruplex.
    Lee JY; Yoon J; Kihm HW; Kim DS
    Biochemistry; 2008 Mar; 47(11):3389-96. PubMed ID: 18298084
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Physical nature of interactions in Zn(II) complexes with 2,2'-bipyridyl: quantum theory of atoms in molecules (QTAIM), interacting quantum atoms (IQA), noncovalent interactions (NCI), and extended transition state coupled with natural orbitals for chemical valence (ETS-NOCV) comparative studies.
    Cukrowski I; de Lange JH; Mitoraj M
    J Phys Chem A; 2014 Jan; 118(3):623-37. PubMed ID: 24377828
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Molecular dynamics simulations to provide new insights into the asymmetrical ammonium ion movement inside of the [d(G3T4G4)]2 G-quadruplex DNA structure.
    Akhshi P; Acton G; Wu G
    J Phys Chem B; 2012 Aug; 116(31):9363-70. PubMed ID: 22780684
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Folding topology of a bimolecular DNA quadruplex containing a stable mini-hairpin motif within the diagonal loop.
    Balkwill GD; Garner TP; Williams HE; Searle MS
    J Mol Biol; 2009 Feb; 385(5):1600-15. PubMed ID: 19070621
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Role of loops in the guanine quadruplex formation by DNA/RNA hybrid analogs of G4T4G4.
    Vondrusková J; Kypr J; Kejnovská I; Fialová M; Vorlícková M
    Int J Biol Macromol; 2008 Dec; 43(5):463-7. PubMed ID: 18812187
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Direct NMR detection of alkali metal ions bound to G-quadruplex DNA.
    Ida R; Wu G
    J Am Chem Soc; 2008 Mar; 130(11):3590-602. PubMed ID: 18293981
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Electron-hole transfer in G-quadruplexes with different tetrad stacking geometries: a combined QM and MD study.
    Lech CJ; Phan AT; Michel-Beyerle ME; Voityuk AA
    J Phys Chem B; 2013 Aug; 117(34):9851-6. PubMed ID: 23906279
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Fluorescent sensor for monitoring structural changes of G-quadruplexes and detection of potassium ion.
    Kong DM; Ma YE; Guo JH; Yang W; Shen HX
    Anal Chem; 2009 Apr; 81(7):2678-84. PubMed ID: 19271760
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Guanines are a quartet's best friend: impact of base substitutions on the kinetics and stability of tetramolecular quadruplexes.
    Gros J; Rosu F; Amrane S; De Cian A; Gabelica V; Lacroix L; Mergny JL
    Nucleic Acids Res; 2007; 35(9):3064-75. PubMed ID: 17452368
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.