These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

132 related articles for article (PubMed ID: 26584145)

  • 1. Accelerating electrostatic interaction calculations with graphical processing units based on new developments of Ewald method using non-uniform fast Fourier transform.
    Yang SC; Wang YL; Jiao GS; Qian HJ; Lu ZY
    J Comput Chem; 2016 Jan; 37(3):378-87. PubMed ID: 26584145
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The ENUF method-Ewald summation based on nonuniform fast Fourier transform: Implementation, parallelization, and application.
    Yang SC; Li B; Zhu YL; Laaksonen A; Wang YL
    J Comput Chem; 2020 Oct; 41(27):2316-2335. PubMed ID: 32808686
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Molecular Dynamics Simulations Accelerated by GPU for Biological Macromolecules with a Non-Ewald Scheme for Electrostatic Interactions.
    Mashimo T; Fukunishi Y; Kamiya N; Takano Y; Fukuda I; Nakamura H
    J Chem Theory Comput; 2013 Dec; 9(12):5599-609. PubMed ID: 26592294
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Notes on "Ewald summation of electrostatic multipole interactions up to quadrupolar level" [J. Chem. Phys. 119, 7471 (2003)].
    Laino T; Hutter J
    J Chem Phys; 2008 Aug; 129(7):074102. PubMed ID: 19044755
    [TBL] [Abstract][Full Text] [Related]  

  • 5. NUDIM: A non-uniform fast Fourier transform based dual-space constraint iterative reconstruction method in biological electron tomography.
    Geng Z; She Z; Zhou Q; Dong Z; Zhan F; Zhang H; Xu J; Gao Z; Dong Y
    J Struct Biol; 2021 Sep; 213(3):107770. PubMed ID: 34303831
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Fast Ewald summation for electrostatic potentials with arbitrary periodicity.
    Shamshirgar DS; Bagge J; Tornberg AK
    J Chem Phys; 2021 Apr; 154(16):164109. PubMed ID: 33940832
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Simple and accurate scheme to compute electrostatic interaction: zero-dipole summation technique for molecular system and application to bulk water.
    Fukuda I; Kamiya N; Yonezawa Y; Nakamura H
    J Chem Phys; 2012 Aug; 137(5):054314. PubMed ID: 22894355
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Fast and spectrally accurate Ewald summation for 2-periodic electrostatic systems.
    Lindbo D; Tornberg AK
    J Chem Phys; 2012 Apr; 136(16):164111. PubMed ID: 22559474
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A fast and accurate computational method for the linear-combination-based isotropic periodic sum.
    Takahashi KZ; Nozawa T; Yasuoka K
    Sci Rep; 2018 Aug; 8(1):11880. PubMed ID: 30089878
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Fast analytical evaluation of intermolecular electrostatic interaction energies using the pseudoatom representation of the electron density. III. Application to crystal structures via the Ewald and direct summation methods.
    Nguyen D; Macchi P; Volkov A
    Acta Crystallogr A Found Adv; 2020 Nov; 76(Pt 6):630-651. PubMed ID: 33125348
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Damped reaction field method and the accelerated convergence of the real space Ewald summation.
    Elvira VH; MacDowell LG
    J Chem Phys; 2014 Oct; 141(16):164108. PubMed ID: 25362273
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Porting ONETEP to graphical processing unit-based coprocessors. 1. FFT box operations.
    Wilkinson K; Skylaris CK
    J Comput Chem; 2013 Oct; 34(28):2446-59. PubMed ID: 24038140
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Real space electrostatics for multipoles. II. Comparisons with the Ewald sum.
    Lamichhane M; Newman KE; Gezelter JD
    J Chem Phys; 2014 Oct; 141(13):134110. PubMed ID: 25296787
    [TBL] [Abstract][Full Text] [Related]  

  • 14. On the calculation of the electrostatic potential, electric field and electric field gradient from the aspherical pseudoatom model. II. Evaluation of the properties in an infinite crystal.
    Weatherly J; Macchi P; Volkov A
    Acta Crystallogr A Found Adv; 2021 Sep; 77(Pt 5):399-419. PubMed ID: 34473095
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Fast calculation method of a CGH for a patch model using a point-based method.
    Ogihara Y; Sakamoto Y
    Appl Opt; 2015 Jan; 54(1):A76-83. PubMed ID: 25967025
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Gaussian split Ewald: A fast Ewald mesh method for molecular simulation.
    Shan Y; Klepeis JL; Eastwood MP; Dror RO; Shaw DE
    J Chem Phys; 2005 Feb; 122(5):54101. PubMed ID: 15740304
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Staggered Mesh Ewald: An extension of the Smooth Particle-Mesh Ewald method adding great versatility.
    Cerutti DS; Duke RE; Darden TA; Lybrand TP
    J Chem Theory Comput; 2009 Sep; 5(9):2322. PubMed ID: 20174456
    [TBL] [Abstract][Full Text] [Related]  

  • 18. An Efficient Linear-Scaling Ewald Method for Long-Range Electrostatic Interactions in Combined QM/MM Calculations.
    Nam K; Gao J; York DM
    J Chem Theory Comput; 2005 Jan; 1(1):2-13. PubMed ID: 26641110
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Accelerating electrostatic pair methods on graphical processing units to study molecules in supercritical carbon dioxide.
    Baker JA; Hirst JD
    Faraday Discuss; 2014; 169():343-57. PubMed ID: 25340544
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Research on fast Fourier transforms algorithm of huge remote sensing image technology with GPU and partitioning technology.
    Yang X; Li XY; Li JG; Ma J; Zhang L; Yang J; Du QY
    Guang Pu Xue Yu Guang Pu Fen Xi; 2014 Feb; 34(2):498-504. PubMed ID: 24822428
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.