BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

330 related articles for article (PubMed ID: 26602507)

  • 1. Mixed Resolution Modeling of Interactions in Condensed-Phase Systems.
    Izvekov S; Voth GA
    J Chem Theory Comput; 2009 Dec; 5(12):3232-44. PubMed ID: 26602507
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Multiscale coarse graining of liquid-state systems.
    Izvekov S; Voth GA
    J Chem Phys; 2005 Oct; 123(13):134105. PubMed ID: 16223273
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The CUMULUS coarse graining method: transferable potentials for water and solutes.
    van Hoof B; Markvoort AJ; van Santen RA; Hilbers PA
    J Phys Chem B; 2011 Aug; 115(33):10001-12. PubMed ID: 21740053
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Hybrid simulations: combining atomistic and coarse-grained force fields using virtual sites.
    Rzepiela AJ; Louhivuori M; Peter C; Marrink SJ
    Phys Chem Chem Phys; 2011 Jun; 13(22):10437-48. PubMed ID: 21494747
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Multiscale Coarse-Graining of Mixed Phospholipid/Cholesterol Bilayers.
    Izvekov S; Voth GA
    J Chem Theory Comput; 2006 May; 2(3):637-48. PubMed ID: 26626671
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Mixing MARTINI: electrostatic coupling in hybrid atomistic-coarse-grained biomolecular simulations.
    Wassenaar TA; Ingólfsson HI; Priess M; Marrink SJ; Schäfer LV
    J Phys Chem B; 2013 Apr; 117(13):3516-30. PubMed ID: 23406326
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A multiscale coarse-graining method for biomolecular systems.
    Izvekov S; Voth GA
    J Phys Chem B; 2005 Feb; 109(7):2469-73. PubMed ID: 16851243
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The multiscale coarse-graining method: assessing its accuracy and introducing density dependent coarse-grain potentials.
    Izvekov S; Chung PW; Rice BM
    J Chem Phys; 2010 Aug; 133(6):064109. PubMed ID: 20707563
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Mixing Atomistic and Coarse Grain Solvation Models for MD Simulations: Let WT4 Handle the Bulk.
    Darré L; Tek A; Baaden M; Pantano S
    J Chem Theory Comput; 2012 Oct; 8(10):3880-94. PubMed ID: 26593029
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Effective force coarse-graining.
    Wang Y; Noid WG; Liu P; Voth GA
    Phys Chem Chem Phys; 2009 Mar; 11(12):2002-15. PubMed ID: 19280011
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Mixed atomistic and coarse-grained molecular dynamics: simulation of a membrane-bound ion channel.
    Shi Q; Izvekov S; Voth GA
    J Phys Chem B; 2006 Aug; 110(31):15045-8. PubMed ID: 16884212
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Procedure for Transferable Coarse-Grained Models of Aqueous Polysaccharides.
    Sauter J; Grafmüller A
    J Chem Theory Comput; 2017 Jan; 13(1):223-236. PubMed ID: 27997210
    [TBL] [Abstract][Full Text] [Related]  

  • 13. The multiscale coarse-graining method. VII. Free energy decomposition of coarse-grained effective potentials.
    Lu L; Voth GA
    J Chem Phys; 2011 Jun; 134(22):224107. PubMed ID: 21682507
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Coarse-Graining of TIP4P/2005, TIP4P-Ew, SPC/E, and TIP3P to Monatomic Anisotropic Water Models Using Relative Entropy Minimization.
    Lu J; Qiu Y; Baron R; Molinero V
    J Chem Theory Comput; 2014 Sep; 10(9):4104-20. PubMed ID: 26588552
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Transferability of coarse-grained force fields: the polymer case.
    Carbone P; Varzaneh HA; Chen X; Müller-Plathe F
    J Chem Phys; 2008 Feb; 128(6):064904. PubMed ID: 18282071
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Multiscale coarse-graining of ionic liquids.
    Wang Y; Izvekov S; Yan T; Voth GA
    J Phys Chem B; 2006 Mar; 110(8):3564-75. PubMed ID: 16494412
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Direct Mixing of Atomistic Solutes and Coarse-Grained Water.
    Orsi M; Ding W; Palaiokostas M
    J Chem Theory Comput; 2014 Oct; 10(10):4684-93. PubMed ID: 26588159
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The multiscale coarse-graining method. X. Improved algorithms for constructing coarse-grained potentials for molecular systems.
    Das A; Lu L; Andersen HC; Voth GA
    J Chem Phys; 2012 May; 136(19):194115. PubMed ID: 22612088
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Particle-based multiscale coarse graining with density-dependent potentials: application to molecular crystals (hexahydro-1,3,5-trinitro-s-triazine).
    Izvekov S; Chung PW; Rice BM
    J Chem Phys; 2011 Jul; 135(4):044112. PubMed ID: 21806095
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Toward a Coarse Graining/All Atoms Force Field (CG/AA) from a Multiscale Optimization Method: An Application to the MCM-41 Mesoporous Silicates.
    Ghoufi A; Morineau D; Lefort R; Malfreyt P
    J Chem Theory Comput; 2010 Oct; 6(10):3212-22. PubMed ID: 26616783
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 17.