134 related articles for article (PubMed ID: 26635141)
1. rcellminer: exploring molecular profiles and drug response of the NCI-60 cell lines in R.
Luna A; Rajapakse VN; Sousa FG; Gao J; Schultz N; Varma S; Reinhold W; Sander C; Pommier Y
Bioinformatics; 2016 Apr; 32(8):1272-4. PubMed ID: 26635141
[TBL] [Abstract][Full Text] [Related]
2. PaxtoolsR: pathway analysis in R using Pathway Commons.
Luna A; Babur Ö; Aksoy BA; Demir E; Sander C
Bioinformatics; 2016 Apr; 32(8):1262-4. PubMed ID: 26685306
[TBL] [Abstract][Full Text] [Related]
3. rTANDEM, an R/Bioconductor package for MS/MS protein identification.
Fournier F; Joly Beauparlant C; Paradis R; Droit A
Bioinformatics; 2014 Aug; 30(15):2233-4. PubMed ID: 24700319
[TBL] [Abstract][Full Text] [Related]
4. DaMiRseq-an R/Bioconductor package for data mining of RNA-Seq data: normalization, feature selection and classification.
Chiesa M; Colombo GI; Piacentini L
Bioinformatics; 2018 Apr; 34(8):1416-1418. PubMed ID: 29236969
[TBL] [Abstract][Full Text] [Related]
5. GRcalculator: an online tool for calculating and mining dose-response data.
Clark NA; Hafner M; Kouril M; Williams EH; Muhlich JL; Pilarczyk M; Niepel M; Sorger PK; Medvedovic M
BMC Cancer; 2017 Oct; 17(1):698. PubMed ID: 29065900
[TBL] [Abstract][Full Text] [Related]
6. DanteR: an extensible R-based tool for quantitative analysis of -omics data.
Taverner T; Karpievitch YV; Polpitiya AD; Brown JN; Dabney AR; Anderson GA; Smith RD
Bioinformatics; 2012 Sep; 28(18):2404-6. PubMed ID: 22815360
[TBL] [Abstract][Full Text] [Related]
7. Proteomics to go: Proteomatic enables the user-friendly creation of versatile MS/MS data evaluation workflows.
Specht M; Kuhlgert S; Fufezan C; Hippler M
Bioinformatics; 2011 Apr; 27(8):1183-4. PubMed ID: 21325302
[TBL] [Abstract][Full Text] [Related]
8. pcaExplorer: an R/Bioconductor package for interacting with RNA-seq principal components.
Marini F; Binder H
BMC Bioinformatics; 2019 Jun; 20(1):331. PubMed ID: 31195976
[TBL] [Abstract][Full Text] [Related]
9. TPWshiny: an interactive R/Shiny app to explore cell line transcriptional responses to anti-cancer drugs.
Zhang P; Palmisano A; Kumar R; Li MC; Doroshow JH; Zhao Y
Bioinformatics; 2022 Jan; 38(2):570-572. PubMed ID: 34450618
[TBL] [Abstract][Full Text] [Related]
10. GUIDEseq: a bioconductor package to analyze GUIDE-Seq datasets for CRISPR-Cas nucleases.
Zhu LJ; Lawrence M; Gupta A; Pagès H; Kucukural A; Garber M; Wolfe SA
BMC Genomics; 2017 May; 18(1):379. PubMed ID: 28506212
[TBL] [Abstract][Full Text] [Related]
11. miRNAmeConverter: an R/bioconductor package for translating mature miRNA names to different miRBase versions.
Haunsberger SJ; Connolly NM; Prehn JH
Bioinformatics; 2017 Feb; 33(4):592-593. PubMed ID: 27797767
[TBL] [Abstract][Full Text] [Related]
12. BiocPkgTools: Toolkit for mining the
Su S; Carey VJ; Shepherd L; Ritchie M; Morgan MT; Davis S
F1000Res; 2019; 8():752. PubMed ID: 31249680
[No Abstract] [Full Text] [Related]
13. compendiumdb: an R package for retrieval and storage of functional genomics data.
Nandal UK; van Kampen AH; Moerland PD
Bioinformatics; 2016 Sep; 32(18):2856-7. PubMed ID: 27323392
[TBL] [Abstract][Full Text] [Related]
14. MSstats: an R package for statistical analysis of quantitative mass spectrometry-based proteomic experiments.
Choi M; Chang CY; Clough T; Broudy D; Killeen T; MacLean B; Vitek O
Bioinformatics; 2014 Sep; 30(17):2524-6. PubMed ID: 24794931
[TBL] [Abstract][Full Text] [Related]
15. Make Interactive Complex Heatmaps in R.
Gu Z; Hübschmann D
Bioinformatics; 2022 Feb; 38(5):1460-1462. PubMed ID: 34864868
[TBL] [Abstract][Full Text] [Related]
16. Synaptome.db: a bioconductor package for synaptic proteomics data.
Sorokina O; Sorokin A; Armstrong JD
Bioinform Adv; 2022; 2(1):vbac086. PubMed ID: 36699346
[TBL] [Abstract][Full Text] [Related]
17. HilbertCurve: an R/Bioconductor package for high-resolution visualization of genomic data.
Gu Z; Eils R; Schlesner M
Bioinformatics; 2016 Aug; 32(15):2372-4. PubMed ID: 27153599
[TBL] [Abstract][Full Text] [Related]
18. lpNet: a linear programming approach to reconstruct signal transduction networks.
Matos MR; Knapp B; Kaderali L
Bioinformatics; 2015 Oct; 31(19):3231-3. PubMed ID: 26026168
[TBL] [Abstract][Full Text] [Related]
19. affylmGUI: a graphical user interface for linear modeling of single channel microarray data.
Wettenhall JM; Simpson KM; Satterley K; Smyth GK
Bioinformatics; 2006 Apr; 22(7):897-9. PubMed ID: 16455752
[TBL] [Abstract][Full Text] [Related]
20. PAA: an R/bioconductor package for biomarker discovery with protein microarrays.
Turewicz M; Ahrens M; May C; Marcus K; Eisenacher M
Bioinformatics; 2016 May; 32(10):1577-9. PubMed ID: 26803161
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
