160 related articles for article (PubMed ID: 26635364)
1. Wasabi: An Integrated Platform for Evolutionary Sequence Analysis and Data Visualization.
Veidenberg A; Medlar A; Löytynoja A
Mol Biol Evol; 2016 Apr; 33(4):1126-30. PubMed ID: 26635364
[TBL] [Abstract][Full Text] [Related]
2. Evolutionary Sequence Analysis and Visualization with Wasabi.
Veidenberg A; Löytynoja A
Methods Mol Biol; 2021; 2231():225-240. PubMed ID: 33289896
[TBL] [Abstract][Full Text] [Related]
3. Phylogeny-Aware Alignment with PRANK and PAGAN.
Löytynoja A
Methods Mol Biol; 2021; 2231():17-37. PubMed ID: 33289884
[TBL] [Abstract][Full Text] [Related]
4. webPRANK: a phylogeny-aware multiple sequence aligner with interactive alignment browser.
Löytynoja A; Goldman N
BMC Bioinformatics; 2010 Nov; 11():579. PubMed ID: 21110866
[TBL] [Abstract][Full Text] [Related]
5. Phylogeny-aware alignment with PRANK.
Löytynoja A
Methods Mol Biol; 2014; 1079():155-70. PubMed ID: 24170401
[TBL] [Abstract][Full Text] [Related]
6. POWER: PhylOgenetic WEb Repeater--an integrated and user-optimized framework for biomolecular phylogenetic analysis.
Lin CY; Lin FK; Lin CH; Lai LW; Hsu HJ; Chen SH; Hsiung CA
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W553-6. PubMed ID: 15980533
[TBL] [Abstract][Full Text] [Related]
7. Ensembl comparative genomics resources.
Herrero J; Muffato M; Beal K; Fitzgerald S; Gordon L; Pignatelli M; Vilella AJ; Searle SM; Amode R; Brent S; Spooner W; Kulesha E; Yates A; Flicek P
Database (Oxford); 2016; 2016():. PubMed ID: 26896847
[TBL] [Abstract][Full Text] [Related]
8. PhyloBot: A Web Portal for Automated Phylogenetics, Ancestral Sequence Reconstruction, and Exploration of Mutational Trajectories.
Hanson-Smith V; Johnson A
PLoS Comput Biol; 2016 Jul; 12(7):e1004976. PubMed ID: 27472806
[TBL] [Abstract][Full Text] [Related]
9. Accurate extension of multiple sequence alignments using a phylogeny-aware graph algorithm.
Löytynoja A; Vilella AJ; Goldman N
Bioinformatics; 2012 Jul; 28(13):1684-91. PubMed ID: 22531217
[TBL] [Abstract][Full Text] [Related]
10. transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences.
Bininda-Emonds OR
BMC Bioinformatics; 2005 Jun; 6():156. PubMed ID: 15969769
[TBL] [Abstract][Full Text] [Related]
11. AGP: a multimethods web server for alignment-free genome phylogeny.
Cheng J; Cao F; Liu Z
Mol Biol Evol; 2013 May; 30(5):1032-7. PubMed ID: 23389766
[TBL] [Abstract][Full Text] [Related]
12. Bayesian coestimation of phylogeny and sequence alignment.
Lunter G; Miklós I; Drummond A; Jensen JL; Hein J
BMC Bioinformatics; 2005 Apr; 6():83. PubMed ID: 15804354
[TBL] [Abstract][Full Text] [Related]
13. Combo: a whole genome comparative browser.
Engels R; Yu T; Burge C; Mesirov JP; DeCaprio D; Galagan JE
Bioinformatics; 2006 Jul; 22(14):1782-3. PubMed ID: 16709588
[TBL] [Abstract][Full Text] [Related]
14. CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between closely related genomes.
Uchiyama I; Higuchi T; Kobayashi I
BMC Bioinformatics; 2006 Oct; 7():472. PubMed ID: 17062155
[TBL] [Abstract][Full Text] [Related]
15. GeneTrees: a phylogenomics resource for prokaryotes.
Tian Y; Dickerman AW
Nucleic Acids Res; 2007 Jan; 35(Database issue):D328-31. PubMed ID: 17151073
[TBL] [Abstract][Full Text] [Related]
16. Dcode.org anthology of comparative genomic tools.
Loots GG; Ovcharenko I
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W56-64. PubMed ID: 15980535
[TBL] [Abstract][Full Text] [Related]
17. OrthoMaM v8: a database of orthologous exons and coding sequences for comparative genomics in mammals.
Douzery EJ; Scornavacca C; Romiguier J; Belkhir K; Galtier N; Delsuc F; Ranwez V
Mol Biol Evol; 2014 Jul; 31(7):1923-8. PubMed ID: 24723423
[TBL] [Abstract][Full Text] [Related]
18. Phylemon: a suite of web tools for molecular evolution, phylogenetics and phylogenomics.
Tárraga J; Medina I; Arbiza L; Huerta-Cepas J; Gabaldón T; Dopazo J; Dopazo H
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W38-42. PubMed ID: 17452346
[TBL] [Abstract][Full Text] [Related]
19. A web-based Tree View (TV) program for the visualization of phylogenetic trees.
Zhai Y; Tchieu J; Saier MH
J Mol Microbiol Biotechnol; 2002 Jan; 4(1):69-70. PubMed ID: 11763971
[TBL] [Abstract][Full Text] [Related]
20. PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences.
Hanekamp K; Bohnebeck U; Beszteri B; Valentin K
Bioinformatics; 2007 Apr; 23(7):793-801. PubMed ID: 17332025
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]