783 related articles for article (PubMed ID: 26670565)
1. Proteogenomics from a bioinformatics angle: A growing field.
Menschaert G; Fenyö D
Mass Spectrom Rev; 2017 Sep; 36(5):584-599. PubMed ID: 26670565
[TBL] [Abstract][Full Text] [Related]
2. Proteogenomics: concepts, applications and computational strategies.
Nesvizhskii AI
Nat Methods; 2014 Nov; 11(11):1114-25. PubMed ID: 25357241
[TBL] [Abstract][Full Text] [Related]
3. Proteogenomics: From next-generation sequencing (NGS) and mass spectrometry-based proteomics to precision medicine.
Ang MY; Low TY; Lee PY; Wan Mohamad Nazarie WF; Guryev V; Jamal R
Clin Chim Acta; 2019 Nov; 498():38-46. PubMed ID: 31421119
[TBL] [Abstract][Full Text] [Related]
4. PROTEOFORMER: deep proteome coverage through ribosome profiling and MS integration.
Crappé J; Ndah E; Koch A; Steyaert S; Gawron D; De Keulenaer S; De Meester E; De Meyer T; Van Criekinge W; Van Damme P; Menschaert G
Nucleic Acids Res; 2015 Mar; 43(5):e29. PubMed ID: 25510491
[TBL] [Abstract][Full Text] [Related]
5. Connecting Proteomics to Next-Generation Sequencing: Proteogenomics and Its Current Applications in Biology.
Low TY; Mohtar MA; Ang MY; Jamal R
Proteomics; 2019 May; 19(10):e1800235. PubMed ID: 30431238
[TBL] [Abstract][Full Text] [Related]
6. Mass spectrometry at the interface of proteomics and genomics.
Krug K; Nahnsen S; Macek B
Mol Biosyst; 2011 Feb; 7(2):284-91. PubMed ID: 20967315
[TBL] [Abstract][Full Text] [Related]
7. Multi-omics Visualization Platform: An extensible Galaxy plug-in for multi-omics data visualization and exploration.
McGowan T; Johnson JE; Kumar P; Sajulga R; Mehta S; Jagtap PD; Griffin TJ
Gigascience; 2020 Apr; 9(4):. PubMed ID: 32236523
[TBL] [Abstract][Full Text] [Related]
8. A tool for integrating genetic and mass spectrometry-based peptide data: Proteogenomics Viewer: PV: A genome browser-like tool, which includes MS data visualization and peptide identification parameters.
Kroll JE; da Silva VL; de Souza SJ; de Souza GA
Bioessays; 2017 Jul; 39(7):. PubMed ID: 28582591
[TBL] [Abstract][Full Text] [Related]
9. Proteogenomics: Key Driver for Clinical Discovery and Personalized Medicine.
Barbieri R; Guryev V; Brandsma CA; Suits F; Bischoff R; Horvatovich P
Adv Exp Med Biol; 2016; 926():21-47. PubMed ID: 27686804
[TBL] [Abstract][Full Text] [Related]
10. Gene model detection using mass spectrometry.
Nanduri B; Wang N; Lawrence ML; Bridges SM; Burgess SC
Methods Mol Biol; 2010; 604():137-44. PubMed ID: 20013369
[TBL] [Abstract][Full Text] [Related]
11. Mass spectrum sequential subtraction speeds up searching large peptide MS/MS spectra datasets against large nucleotide databases for proteogenomics.
Helmy M; Sugiyama N; Tomita M; Ishihama Y
Genes Cells; 2012 Aug; 17(8):633-44. PubMed ID: 22686349
[TBL] [Abstract][Full Text] [Related]
12. An integrative proteogenomics approach reveals peptides encoded by annotated lincRNA in the mouse kidney inner medulla.
Flower CT; Chen L; Jung HJ; Raghuram V; Knepper MA; Yang CR
Physiol Genomics; 2020 Oct; 52(10):485-491. PubMed ID: 32866085
[TBL] [Abstract][Full Text] [Related]
13. Peptimapper: proteogenomics workflow for the expert annotation of eukaryotic genomes.
Guillot L; Delage L; Viari A; Vandenbrouck Y; Com E; Ritter A; Lavigne R; Marie D; Peterlongo P; Potin P; Pineau C
BMC Genomics; 2019 Jan; 20(1):56. PubMed ID: 30654742
[TBL] [Abstract][Full Text] [Related]
14. Methods for Optimization of Protein Extraction and Proteogenomic Mapping in Sweet Potato.
Al-Mohanna T; Bokros NT; Ahsan N; Popescu GV; Popescu SC
Methods Mol Biol; 2020; 2139():309-324. PubMed ID: 32462596
[TBL] [Abstract][Full Text] [Related]
15. High-throughput parallel proteogenomics: a bacterial case study.
Chapman B; Bellgard M
Proteomics; 2014 Dec; 14(23-24):2780-9. PubMed ID: 25354770
[TBL] [Abstract][Full Text] [Related]
16. PGx: Putting Peptides to BED.
Askenazi M; Ruggles KV; Fenyö D
J Proteome Res; 2016 Mar; 15(3):795-9. PubMed ID: 26638927
[TBL] [Abstract][Full Text] [Related]
17. Proteogenomic Methods to Improve Genome Annotation.
Datta KK; Madugundu AK; Gowda H
Methods Mol Biol; 2016; 1410():77-89. PubMed ID: 26867739
[TBL] [Abstract][Full Text] [Related]
18. An overview of technologies for MS-based proteomics-centric multi-omics.
Rajczewski AT; Jagtap PD; Griffin TJ
Expert Rev Proteomics; 2022 Mar; 19(3):165-181. PubMed ID: 35466851
[TBL] [Abstract][Full Text] [Related]
19. Proteomics techniques for the detection of translated pseudogenes.
Ucciferri N; Rocchiccioli S
Methods Mol Biol; 2014; 1167():187-95. PubMed ID: 24823778
[TBL] [Abstract][Full Text] [Related]
20. Integrated Transcriptomic-Proteomic Analysis Using a Proteogenomic Workflow Refines Rat Genome Annotation.
Kumar D; Yadav AK; Jia X; Mulvenna J; Dash D
Mol Cell Proteomics; 2016 Jan; 15(1):329-39. PubMed ID: 26560066
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
