BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

1195 related articles for article (PubMed ID: 26680022)

  • 21. Fast, accurate, and lightweight analysis of BS-treated reads with ERNE 2.
    Prezza N; Vezzi F; Käller M; Policriti A
    BMC Bioinformatics; 2016 Mar; 17 Suppl 4(Suppl 4):69. PubMed ID: 26961371
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Bioinformatics Analysis of DNA Methylation Through Bisulfite Sequencing Data.
    Sang F
    Methods Mol Biol; 2021; 2198():441-450. PubMed ID: 32822049
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Comprehensive Whole DNA Methylome Analysis by Integrating MeDIP-seq and MRE-seq.
    Xing X; Zhang B; Li D; Wang T
    Methods Mol Biol; 2018; 1708():209-246. PubMed ID: 29224147
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Evaluation of preprocessing, mapping and postprocessing algorithms for analyzing whole genome bisulfite sequencing data.
    Tsuji J; Weng Z
    Brief Bioinform; 2016 Nov; 17(6):938-952. PubMed ID: 26628557
    [TBL] [Abstract][Full Text] [Related]  

  • 25. BRAT-BW: efficient and accurate mapping of bisulfite-treated reads.
    Harris EY; Ponts N; Le Roch KG; Lonardi S
    Bioinformatics; 2012 Jul; 28(13):1795-6. PubMed ID: 22563065
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Approaches for the Analysis and Interpretation of Whole Genome Bisulfite Sequencing Data.
    Stuart T; Buckberry S; Lister R
    Methods Mol Biol; 2018; 1767():299-310. PubMed ID: 29524143
    [TBL] [Abstract][Full Text] [Related]  

  • 27. pWGBSSimla: a profile-based whole-genome bisulfite sequencing data simulator incorporating methylation QTLs, allele-specific methylations and differentially methylated regions.
    Chung RH; Kang CY
    Bioinformatics; 2020 Feb; 36(3):660-665. PubMed ID: 31397839
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Targeted Bisulfite Sequencing Using the SeqCap Epi Enrichment System.
    Wendt J; Rosenbaum H; Richmond TA; Jeddeloh JA; Burgess DL
    Methods Mol Biol; 2018; 1708():383-405. PubMed ID: 29224155
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Targeted alignment and end repair elimination increase alignment and methylation measure accuracy for reduced representation bisulfite sequencing data.
    Baheti S; Kanwar R; Goelzenleuchter M; Kocher JP; Beutler AS; Sun Z
    BMC Genomics; 2016 Feb; 17():149. PubMed ID: 26922377
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Genome-wide DNA methylome variation in two genetically distinct chicken lines using MethylC-seq.
    Li J; Li R; Wang Y; Hu X; Zhao Y; Li L; Feng C; Gu X; Liang F; Lamont SJ; Hu S; Zhou H; Li N
    BMC Genomics; 2015 Oct; 16():851. PubMed ID: 26497311
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Analyzing the cancer methylome through targeted bisulfite sequencing.
    Lee EJ; Luo J; Wilson JM; Shi H
    Cancer Lett; 2013 Nov; 340(2):171-8. PubMed ID: 23200671
    [TBL] [Abstract][Full Text] [Related]  

  • 32. An integrated package for bisulfite DNA methylation data analysis with Indel-sensitive mapping.
    Zhou Q; Lim JQ; Sung WK; Li G
    BMC Bioinformatics; 2019 Jan; 20(1):47. PubMed ID: 30669962
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Bioinformatic Analysis of Methylation Patterns Using Bisulfite Sequencing Data.
    Asselman J
    Methods Mol Biol; 2019; 1858():157-175. PubMed ID: 30414117
    [TBL] [Abstract][Full Text] [Related]  

  • 34. DNA methylation estimation using methylation-sensitive restriction enzyme bisulfite sequencing (MREBS).
    Bonora G; Rubbi L; Morselli M; Ma F; Chronis C; Plath K; Pellegrini M
    PLoS One; 2019; 14(4):e0214368. PubMed ID: 30946758
    [TBL] [Abstract][Full Text] [Related]  

  • 35. BS-RNA: An efficient mapping and annotation tool for RNA bisulfite sequencing data.
    Liang F; Hao L; Wang J; Shi S; Xiao J; Li R
    Comput Biol Chem; 2016 Dec; 65():173-177. PubMed ID: 27647160
    [TBL] [Abstract][Full Text] [Related]  

  • 36. MethylStar: A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing data.
    Shahryary Y; Hazarika RR; Johannes F
    BMC Genomics; 2020 Jul; 21(1):479. PubMed ID: 32660416
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Genome-wide DNA methylation profiling in zebrafish.
    Murphy PJ; Cairns BR
    Methods Cell Biol; 2016; 135():345-59. PubMed ID: 27443935
    [TBL] [Abstract][Full Text] [Related]  

  • 38. A new approach to decode DNA methylome and genomic variants simultaneously from double strand bisulfite sequencing.
    Liang J; Zhang K; Yang J; Li X; Li Q; Wang Y; Cai W; Teng H; Sun Z
    Brief Bioinform; 2021 Nov; 22(6):. PubMed ID: 34058751
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Advanced methylome analysis after bisulfite deep sequencing: an example in Arabidopsis.
    Dinh HQ; Dubin M; Sedlazeck FJ; Lettner N; Mittelsten Scheid O; von Haeseler A
    PLoS One; 2012; 7(7):e41528. PubMed ID: 22911809
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Detection of differentially methylated regions from bisulfite-seq data by hidden Markov models incorporating genome-wide methylation level distributions.
    Saito Y; Mituyama T
    BMC Genomics; 2015; 16 Suppl 12(Suppl 12):S3. PubMed ID: 26681544
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 60.