These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
46. Mapping genetically compensatory pathways from synthetic lethal interactions in yeast. Ma X; Tarone AM; Li W PLoS One; 2008 Apr; 3(4):e1922. PubMed ID: 18398455 [TBL] [Abstract][Full Text] [Related]
47. Is newer better?--evaluating the effects of data curation on integrated analyses in Saccharomyces cerevisiae. James K; Wipat A; Hallinan J Integr Biol (Camb); 2012 Jul; 4(7):715-27. PubMed ID: 22526920 [TBL] [Abstract][Full Text] [Related]
48. Semi-supervised prediction of gene regulatory networks using machine learning algorithms. Patel N; Wang JT J Biosci; 2015 Oct; 40(4):731-40. PubMed ID: 26564975 [TBL] [Abstract][Full Text] [Related]
49. Mapping Gene Ontology to proteins based on protein-protein interaction data. Deng M; Tu Z; Sun F; Chen T Bioinformatics; 2004 Apr; 20(6):895-902. PubMed ID: 14751964 [TBL] [Abstract][Full Text] [Related]
50. Coverage and error models of protein-protein interaction data by directed graph analysis. Chiang T; Scholtens D; Sarkar D; Gentleman R; Huber W Genome Biol; 2007; 8(9):R186. PubMed ID: 17845715 [TBL] [Abstract][Full Text] [Related]
52. Characterizing the functional similarity of enzymes with high co-citation in interaction networks. Tothmeresz L; Grolmusz V Protein Pept Lett; 2013 Oct; 20(10):1181-7. PubMed ID: 22973847 [TBL] [Abstract][Full Text] [Related]
54. Using Formal Concept Analysis to Identify Negative Correlations in Gene Expression Data. Tu X; Wang Y; Zhang M; Wu J IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(2):380-91. PubMed ID: 27045834 [TBL] [Abstract][Full Text] [Related]
55. Outlier detection at the transcriptome-proteome interface. Gunawardana Y; Fujiwara S; Takeda A; Woo J; Woelk C; Niranjan M Bioinformatics; 2015 Aug; 31(15):2530-6. PubMed ID: 25819671 [TBL] [Abstract][Full Text] [Related]
56. Functional enrichment analyses and construction of functional similarity networks with high confidence function prediction by PFP. Hawkins T; Chitale M; Kihara D BMC Bioinformatics; 2010 May; 11():265. PubMed ID: 20482861 [TBL] [Abstract][Full Text] [Related]
57. Clustering and Differential Alignment Algorithm: Identification of Early Stage Regulators in the Arabidopsis thaliana Iron Deficiency Response. Koryachko A; Matthiadis A; Muhammad D; Foret J; Brady SM; Ducoste JJ; Tuck J; Long TA; Williams C PLoS One; 2015; 10(8):e0136591. PubMed ID: 26317202 [TBL] [Abstract][Full Text] [Related]
58. A Geometric Clustering Tool (AGCT) to robustly unravel the inner cluster structures of time-series gene expressions. Nock R; Polouliakh N; Nielsen F; Oka K; Connell CR; Heimhofer C; Shibanai K; Ghosh S; Aisaki KI; Kitajima S; Kanno J; Akama T; Kitano H PLoS One; 2020; 15(7):e0233755. PubMed ID: 32628677 [TBL] [Abstract][Full Text] [Related]
59. Time warping of evolutionary distant temporal gene expression data based on noise suppression. Goltsev Y; Papatsenko D BMC Bioinformatics; 2009 Oct; 10():353. PubMed ID: 19857268 [TBL] [Abstract][Full Text] [Related]