90 related articles for article (PubMed ID: 26705741)
21. Prediction of protein structural class for the twilight zone sequences.
Kurgan L; Chen K
Biochem Biophys Res Commun; 2007 Jun; 357(2):453-60. PubMed ID: 17433260
[TBL] [Abstract][Full Text] [Related]
22. BiasViz: visualization of amino acid biased regions in protein alignments.
Huska MR; Buschmann H; Andrade-Navarro MA
Bioinformatics; 2007 Nov; 23(22):3093-4. PubMed ID: 17921493
[TBL] [Abstract][Full Text] [Related]
23. An alternative model of amino acid replacement.
Crooks GE; Brenner SE
Bioinformatics; 2005 Apr; 21(7):975-80. PubMed ID: 15531614
[TBL] [Abstract][Full Text] [Related]
24. Analysis of similarity/dissimilarity of protein sequences.
Yao YH; Dai Q; Li C; He PA; Nan XY; Zhang YZ
Proteins; 2008 Dec; 73(4):864-71. PubMed ID: 18536018
[TBL] [Abstract][Full Text] [Related]
25. Extension of molecular similarity analysis approach to classification of DNA sequences using DNA descriptors.
Jayalakshmi R; Natarajan R; Vivekanandan M
SAR QSAR Environ Res; 2011 Mar; 22(1-2):21-34. PubMed ID: 21391139
[TBL] [Abstract][Full Text] [Related]
26. Using an alignment of fragment strings for comparing protein structures.
Friedberg I; Harder T; Kolodny R; Sitbon E; Li Z; Godzik A
Bioinformatics; 2007 Jan; 23(2):e219-24. PubMed ID: 17237095
[TBL] [Abstract][Full Text] [Related]
27. Alignment-free sequence comparison using N-dimensional similarity space.
Jayalakshmi R; Natarajan R; Vivekanandan M; Natarajan GS
Curr Comput Aided Drug Des; 2010 Dec; 6(4):290-6. PubMed ID: 20883198
[TBL] [Abstract][Full Text] [Related]
28. Simulated annealing algorithm for the multiple sequence alignment problem: the approach of polymers in a random medium.
Hernández-Guía M; Mulet R; Rodríguez-Pérez S
Phys Rev E Stat Nonlin Soft Matter Phys; 2005 Sep; 72(3 Pt 1):031915. PubMed ID: 16241490
[TBL] [Abstract][Full Text] [Related]
29. CLEMAPS: multiple alignment of protein structures based on conformational letters.
Liu X; Zhao YP; Zheng WM
Proteins; 2008 May; 71(2):728-36. PubMed ID: 17979193
[TBL] [Abstract][Full Text] [Related]
30. A 3D graphical representation of protein sequences based on the Gray code.
He PA; Li D; Zhang Y; Wang X; Yao Y
J Theor Biol; 2012 Jul; 304():81-7. PubMed ID: 22554947
[TBL] [Abstract][Full Text] [Related]
31. Remote protein homology detection using recurrence quantification analysis and amino acid physicochemical properties.
Yang Y; Tantoso E; Li KB
J Theor Biol; 2008 May; 252(1):145-54. PubMed ID: 18342336
[TBL] [Abstract][Full Text] [Related]
32. Inverse protein folding in 2D HP mode (extended abstract).
Gupta A; Manuch J; Stacho L
Proc IEEE Comput Syst Bioinform Conf; 2004; ():311-8. PubMed ID: 16448024
[TBL] [Abstract][Full Text] [Related]
33. Convergent Island Statistics: a fast method for determining local alignment score significance.
Poleksic A; Danzer JF; Hambly K; Debe DA
Bioinformatics; 2005 Jun; 21(12):2827-31. PubMed ID: 15817690
[TBL] [Abstract][Full Text] [Related]
34. Clustering of protein structures using hydrophobic free energy and solvent accessibility of proteins.
Yu ZG; Anh VV; Lau KS; Zhou LQ
Phys Rev E Stat Nonlin Soft Matter Phys; 2006 Mar; 73(3 Pt 1):031920. PubMed ID: 16605571
[TBL] [Abstract][Full Text] [Related]
35. Real spherical harmonic expansion coefficients as 3D shape descriptors for protein binding pocket and ligand comparisons.
Morris RJ; Najmanovich RJ; Kahraman A; Thornton JM
Bioinformatics; 2005 May; 21(10):2347-55. PubMed ID: 15728116
[TBL] [Abstract][Full Text] [Related]
36. Descriptors of 2D-dynamic graphs as a classification tool of DNA sequences.
Wąż P; Bielińska-Wąż D; Nandy A
J Math Chem; 2014; 52(1):132-140. PubMed ID: 32214592
[TBL] [Abstract][Full Text] [Related]
37. A novel model for protein sequence similarity analysis based on spectral radius.
Wu C; Gao R; De Marinis Y; Zhang Y
J Theor Biol; 2018 Jun; 446():61-70. PubMed ID: 29524440
[TBL] [Abstract][Full Text] [Related]
38. Constrained multiple sequence alignment tool development and its application to RNase family alignment.
Tang CY; Lu CL; Chang MD; Tsai YT; Sun YJ; Chao KM; Chang JM; Chiou YH; Wu CM; Chang HT; Chou WI
Proc IEEE Comput Soc Bioinform Conf; 2002; 1():127-37. PubMed ID: 15838130
[TBL] [Abstract][Full Text] [Related]
39. Prediction of protein structure classes with flexible neural tree.
Bao W; Chen Y; Wang D
Biomed Mater Eng; 2014; 24(6):3797-806. PubMed ID: 25227096
[TBL] [Abstract][Full Text] [Related]
40. A coarse-grained Langevin molecular dynamics approach to de novo protein structure prediction.
Sasaki TN; Cetin H; Sasai M
Biochem Biophys Res Commun; 2008 May; 369(2):500-6. PubMed ID: 18294960
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]