161 related articles for article (PubMed ID: 26776187)
21. Inferring copy number and genotype in tumour exome data.
Amarasinghe KC; Li J; Hunter SM; Ryland GL; Cowin PA; Campbell IG; Halgamuge SK
BMC Genomics; 2014 Aug; 15(1):732. PubMed ID: 25167919
[TBL] [Abstract][Full Text] [Related]
22. Impact of post-alignment processing in variant discovery from whole exome data.
Tian S; Yan H; Kalmbach M; Slager SL
BMC Bioinformatics; 2016 Oct; 17(1):403. PubMed ID: 27716037
[TBL] [Abstract][Full Text] [Related]
23. Accuracy and reproducibility of somatic point mutation calling in clinical-type targeted sequencing data.
Karimnezhad A; Palidwor GA; Thavorn K; Stewart DJ; Campbell PA; Lo B; Perkins TJ
BMC Med Genomics; 2020 Oct; 13(1):156. PubMed ID: 33059707
[TBL] [Abstract][Full Text] [Related]
24. Efficient identification of somatic mutations in acute myeloid leukaemia using whole exome sequencing of fingernail derived DNA as germline control.
Kakadia PM; Van de Water N; Browett PJ; Bohlander SK
Sci Rep; 2018 Sep; 8(1):13751. PubMed ID: 30213991
[TBL] [Abstract][Full Text] [Related]
25. Variant detection sensitivity and biases in whole genome and exome sequencing.
Meynert AM; Ansari M; FitzPatrick DR; Taylor MS
BMC Bioinformatics; 2014 Jul; 15(1):247. PubMed ID: 25038816
[TBL] [Abstract][Full Text] [Related]
26. Identification of somatic and germline mutations using whole exome sequencing of congenital acute lymphoblastic leukemia.
Chang VY; Basso G; Sakamoto KM; Nelson SF
BMC Cancer; 2013 Feb; 13():55. PubMed ID: 23379653
[TBL] [Abstract][Full Text] [Related]
27. Assigning clinical meaning to somatic and germ-line whole-exome sequencing data in a prospective cancer precision medicine study.
Ghazani AA; Oliver NM; St Pierre JP; Garofalo A; Rainville IR; Hiller E; Treacy DJ; Rojas-Rudilla V; Wood S; Bair E; Parello M; Huang F; Giannakis M; Wilson FH; Stover EH; Corsello SM; Nguyen T; Rana HQ; Church AJ; Lowenstein C; Cibulskis C; Amin-Mansour A; Heng J; Brais L; Santos A; Bauer P; Waldron A; Lo P; Gorman M; Lydon CA; Welch M; McNamara P; Gabriel S; Sholl LM; Lindeman NI; Garber JE; Joffe S; Van Allen EM; Gray SW; Ja Nne PA; Garraway LA; Wagle N
Genet Med; 2017 Jul; 19(7):787-795. PubMed ID: 28125075
[TBL] [Abstract][Full Text] [Related]
28. Combination of RNA- and exome sequencing: Increasing specificity for identification of somatic point mutations and indels in acute leukaemia.
Hansen MC; Herborg LL; Hansen M; Roug AS; Hokland P
Leuk Res; 2016 Dec; 51():27-31. PubMed ID: 27821287
[TBL] [Abstract][Full Text] [Related]
29. Validation of multiple single nucleotide variation calls by additional exome analysis with a semiconductor sequencer to supplement data of whole-genome sequencing of a human population.
Motoike IN; Matsumoto M; Danjoh I; Katsuoka F; Kojima K; Nariai N; Sato Y; Yamaguchi-Kabata Y; Ito S; Kudo H; Nishijima I; Nishikawa S; Pan X; Saito R; Saito S; Saito T; Shirota M; Tsuda K; Yokozawa J; Igarashi K; Minegishi N; Tanabe O; Fuse N; Nagasaki M; Kinoshita K; Yasuda J; Yamamoto M
BMC Genomics; 2014 Aug; 15(1):673. PubMed ID: 25109789
[TBL] [Abstract][Full Text] [Related]
30. Evaluation of an optimized germline exomes pipeline using BWA-MEM2 and Dragen-GATK tools.
Alganmi N; Abusamra H
PLoS One; 2023; 18(8):e0288371. PubMed ID: 37535628
[TBL] [Abstract][Full Text] [Related]
31. Medical implications of technical accuracy in genome sequencing.
Goldfeder RL; Priest JR; Zook JM; Grove ME; Waggott D; Wheeler MT; Salit M; Ashley EA
Genome Med; 2016 Mar; 8(1):24. PubMed ID: 26932475
[TBL] [Abstract][Full Text] [Related]
32. A survey of tools for variant analysis of next-generation genome sequencing data.
Pabinger S; Dander A; Fischer M; Snajder R; Sperk M; Efremova M; Krabichler B; Speicher MR; Zschocke J; Trajanoski Z
Brief Bioinform; 2014 Mar; 15(2):256-78. PubMed ID: 23341494
[TBL] [Abstract][Full Text] [Related]
33. Tumor Mutational Burden From Tumor-Only Sequencing Compared With Germline Subtraction From Paired Tumor and Normal Specimens.
Parikh K; Huether R; White K; Hoskinson D; Beaubier N; Dong H; Adjei AA; Mansfield AS
JAMA Netw Open; 2020 Feb; 3(2):e200202. PubMed ID: 32108894
[TBL] [Abstract][Full Text] [Related]
34. High-Quality Exome Sequencing of Whole-Genome Amplified Neonatal Dried Blood Spot DNA.
Poulsen JB; Lescai F; Grove J; Bækvad-Hansen M; Christiansen M; Hagen CM; Maller J; Stevens C; Li S; Li Q; Sun J; Wang J; Nordentoft M; Werge TM; Mortensen PB; Børglum AD; Daly M; Hougaard DM; Bybjerg-Grauholm J; Hollegaard MV
PLoS One; 2016; 11(4):e0153253. PubMed ID: 27089011
[TBL] [Abstract][Full Text] [Related]
35. TMC-SNPdb: an Indian germline variant database derived from whole exome sequences.
Upadhyay P; Gardi N; Desai S; Sahoo B; Singh A; Togar T; Iyer P; Prasad R; Chandrani P; Gupta S; Dutt A
Database (Oxford); 2016; 2016():. PubMed ID: 27402678
[TBL] [Abstract][Full Text] [Related]
36. ExScalibur: A High-Performance Cloud-Enabled Suite for Whole Exome Germline and Somatic Mutation Identification.
Bao R; Hernandez K; Huang L; Kang W; Bartom E; Onel K; Volchenboum S; Andrade J
PLoS One; 2015; 10(8):e0135800. PubMed ID: 26271043
[TBL] [Abstract][Full Text] [Related]
37. Optimization of Population Frequency Cutoffs for Filtering Common Germline Polymorphisms from Tumor-Only Next-Generation Sequencing Data.
McNulty SN; Parikh BA; Duncavage EJ; Heusel JW; Pfeifer JD
J Mol Diagn; 2019 Sep; 21(5):903-912. PubMed ID: 31251990
[TBL] [Abstract][Full Text] [Related]
38. Imputation-based assessment of next generation rare exome variant arrays.
Martin AR; Tse G; Bustamante CD; Kenny EE
Pac Symp Biocomput; 2014; ():241-52. PubMed ID: 24297551
[TBL] [Abstract][Full Text] [Related]
39. Evaluation of exome filtering techniques for the analysis of clinically relevant genes.
Kernohan KD; Hartley T; Alirezaie N; ; Robinson PN; Dyment DA; Boycott KM
Hum Mutat; 2018 Feb; 39(2):197-201. PubMed ID: 29193559
[TBL] [Abstract][Full Text] [Related]
40. Origins and characterization of variants shared between databases of somatic and germline human mutations.
Meyerson W; Leisman J; Navarro FCP; Gerstein M
BMC Bioinformatics; 2020 Jun; 21(1):227. PubMed ID: 32498674
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
