These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
110 related articles for article (PubMed ID: 26788439)
1. Structural homology guided alignment of cysteine rich proteins. Shafee TM; Robinson AJ; van der Weerden N; Anderson MA Springerplus; 2016; 5():27. PubMed ID: 26788439 [TBL] [Abstract][Full Text] [Related]
2. AlignStat: a web-tool and R package for statistical comparison of alternative multiple sequence alignments. Shafee T; Cooke I BMC Bioinformatics; 2016 Oct; 17(1):434. PubMed ID: 27784265 [TBL] [Abstract][Full Text] [Related]
4. TM-align: a protein structure alignment algorithm based on the TM-score. Zhang Y; Skolnick J Nucleic Acids Res; 2005; 33(7):2302-9. PubMed ID: 15849316 [TBL] [Abstract][Full Text] [Related]
5. transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences. Bininda-Emonds OR BMC Bioinformatics; 2005 Jun; 6():156. PubMed ID: 15969769 [TBL] [Abstract][Full Text] [Related]
6. Large-scale comparison of protein sequence alignment algorithms with structure alignments. Sauder JM; Arthur JW; Dunbrack RL Proteins; 2000 Jul; 40(1):6-22. PubMed ID: 10813826 [TBL] [Abstract][Full Text] [Related]
7. NdPASA: a novel pairwise protein sequence alignment algorithm that incorporates neighbor-dependent amino acid propensities. Wang J; Feng JA Proteins; 2005 Feb; 58(3):628-37. PubMed ID: 15616964 [TBL] [Abstract][Full Text] [Related]
8. Non-sequential protein structure alignment by conformational space annealing and local refinement. Joung I; Kim JY; Joo K; Lee J PLoS One; 2019; 14(1):e0210177. PubMed ID: 30699145 [TBL] [Abstract][Full Text] [Related]
9. MatAlign: precise protein structure comparison by matrix alignment. Aung Z; Tan KL J Bioinform Comput Biol; 2006 Dec; 4(6):1197-216. PubMed ID: 17245810 [TBL] [Abstract][Full Text] [Related]
11. Protein folds and families: sequence and structure alignments. Holm L; Sander C Nucleic Acids Res; 1999 Jan; 27(1):244-7. PubMed ID: 9847191 [TBL] [Abstract][Full Text] [Related]
12. Genomic multiple sequence alignments: refinement using a genetic algorithm. Wang C; Lefkowitz EJ BMC Bioinformatics; 2005 Aug; 6():200. PubMed ID: 16086841 [TBL] [Abstract][Full Text] [Related]
13. Comparative analysis of protein structure alignments. Mayr G; Domingues FS; Lackner P BMC Struct Biol; 2007 Jul; 7():50. PubMed ID: 17672887 [TBL] [Abstract][Full Text] [Related]
14. mTM-align: an algorithm for fast and accurate multiple protein structure alignment. Dong R; Peng Z; Zhang Y; Yang J Bioinformatics; 2018 May; 34(10):1719-1725. PubMed ID: 29281009 [TBL] [Abstract][Full Text] [Related]
15. Optimal classification of protein sequences and selection of representative sets from multiple alignments: application to homologous families and lessons for structural genomics. May AC Protein Eng; 2001 Apr; 14(4):209-17. PubMed ID: 11391012 [TBL] [Abstract][Full Text] [Related]
16. Application of protein structure alignments to iterated hidden Markov model protocols for structure prediction. Scheeff ED; Bourne PE BMC Bioinformatics; 2006 Sep; 7():410. PubMed ID: 16970830 [TBL] [Abstract][Full Text] [Related]
17. Protein structure mining using a structural alphabet. Tyagi M; de Brevern AG; Srinivasan N; Offmann B Proteins; 2008 May; 71(2):920-37. PubMed ID: 18004784 [TBL] [Abstract][Full Text] [Related]