BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

233 related articles for article (PubMed ID: 26817607)

  • 1. RDDpred: a condition-specific RNA-editing prediction model from RNA-seq data.
    Kim MS; Hur B; Kim S
    BMC Genomics; 2016 Jan; 17 Suppl 1(Suppl 1):5. PubMed ID: 26817607
    [TBL] [Abstract][Full Text] [Related]  

  • 2. JACUSA: site-specific identification of RNA editing events from replicate sequencing data.
    Piechotta M; Wyler E; Ohler U; Landthaler M; Dieterich C
    BMC Bioinformatics; 2017 Jan; 18(1):7. PubMed ID: 28049429
    [TBL] [Abstract][Full Text] [Related]  

  • 3. RCARE: RNA Sequence Comparison and Annotation for RNA Editing.
    Lee SY; Joung JG; Park CH; Park JH; Kim JH
    BMC Med Genomics; 2015; 8 Suppl 2(Suppl 2):S8. PubMed ID: 26043858
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Biochemical and Transcriptome-Wide Identification of A-to-I RNA Editing Sites by ICE-Seq.
    Okada S; Sakurai M; Ueda H; Suzuki T
    Methods Enzymol; 2015; 560():331-53. PubMed ID: 26253977
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Genome-Wide Analysis of A-to-I RNA Editing.
    Savva YA; Laurent GS; Reenan RA
    Methods Mol Biol; 2016; 1358():255-68. PubMed ID: 26463388
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Automated Isoform Diversity Detector (AIDD): a pipeline for investigating transcriptome diversity of RNA-seq data.
    Plonski NM; Johnson E; Frederick M; Mercer H; Fraizer G; Meindl R; Casadesus G; Piontkivska H
    BMC Bioinformatics; 2020 Dec; 21(Suppl 18):578. PubMed ID: 33375933
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Detection theory in identification of RNA-DNA sequence differences using RNA-sequencing.
    Toung JM; Lahens N; Hogenesch JB; Grant G
    PLoS One; 2014; 9(11):e112040. PubMed ID: 25396741
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Detection of post-transcriptional RNA editing events.
    Picardi E; D'Erchia AM; Gallo A; Pesole G
    Methods Mol Biol; 2015; 1269():189-205. PubMed ID: 25577380
    [TBL] [Abstract][Full Text] [Related]  

  • 9. DARNED: a DAtabase of RNa EDiting in humans.
    Kiran A; Baranov PV
    Bioinformatics; 2010 Jul; 26(14):1772-6. PubMed ID: 20547637
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Limited RNA editing in exons of mouse liver and adipose.
    Lagarrigue S; Hormozdiari F; Martin LJ; Lecerf F; Hasin Y; Rau C; Hagopian R; Xiao Y; Yan J; Drake TA; Ghazalpour A; Eskin E; Lusis AJ
    Genetics; 2013 Apr; 193(4):1107-15. PubMed ID: 23410828
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Investigating RNA editing in deep transcriptome datasets with REDItools and REDIportal.
    Lo Giudice C; Tangaro MA; Pesole G; Picardi E
    Nat Protoc; 2020 Mar; 15(3):1098-1131. PubMed ID: 31996844
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Darned in 2013: inclusion of model organisms and linking with Wikipedia.
    Kiran AM; O'Mahony JJ; Sanjeev K; Baranov PV
    Nucleic Acids Res; 2013 Jan; 41(Database issue):D258-61. PubMed ID: 23074185
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Databases for RNA Editing Collections.
    Lo Giudice C; Mansi L; Pesole G; Picardi E
    Methods Mol Biol; 2021; 2284():467-480. PubMed ID: 33835458
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The Extent of mRNA Editing Is Limited in Chicken Liver and Adipose, but Impacted by Tissular Context, Genotype, Age, and Feeding as Exemplified with a Conserved Edited Site in COG3.
    Roux PF; Frésard L; Boutin M; Leroux S; Klopp C; Djari A; Esquerré D; Martin PG; Zerjal T; Gourichon D; Pitel F; Lagarrigue S
    G3 (Bethesda); 2015 Dec; 6(2):321-35. PubMed ID: 26637431
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome.
    Peng Z; Cheng Y; Tan BC; Kang L; Tian Z; Zhu Y; Zhang W; Liang Y; Hu X; Tan X; Guo J; Dong Z; Liang Y; Bao L; Wang J
    Nat Biotechnol; 2012 Feb; 30(3):253-60. PubMed ID: 22327324
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Profiling RNA editing in human tissues: towards the inosinome Atlas.
    Picardi E; Manzari C; Mastropasqua F; Aiello I; D'Erchia AM; Pesole G
    Sci Rep; 2015 Oct; 5():14941. PubMed ID: 26449202
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing.
    Mazloomian A; Meyer IM
    RNA Biol; 2015; 12(12):1391-401. PubMed ID: 26512413
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Genome-Wide Characterization of RNA Editing in Chicken Embryos Reveals Common Features among Vertebrates.
    Frésard L; Leroux S; Roux PF; Klopp C; Fabre S; Esquerré D; Dehais P; Djari A; Gourichon D; Lagarrigue S; Pitel F
    PLoS One; 2015; 10(5):e0126776. PubMed ID: 26024316
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Comprehensive analysis of human small RNA sequencing data provides insights into expression profiles and miRNA editing.
    Gong J; Wu Y; Zhang X; Liao Y; Sibanda VL; Liu W; Guo AY
    RNA Biol; 2014; 11(11):1375-85. PubMed ID: 25692236
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Analysis of RNA Editing Sites from RNA-Seq Data Using GIREMI.
    Zhang Q
    Methods Mol Biol; 2018; 1751():101-108. PubMed ID: 29508292
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.