767 related articles for article (PubMed ID: 26829319)
21. Low-Cost Genome-Scale Phasing with Barcode-Linked Sequencing.
Redin D
Methods Mol Biol; 2023; 2590():85-99. PubMed ID: 36335494
[TBL] [Abstract][Full Text] [Related]
22. Haplotype-resolved genome sequencing of a Gujarati Indian individual.
Kitzman JO; Mackenzie AP; Adey A; Hiatt JB; Patwardhan RP; Sudmant PH; Ng SB; Alkan C; Qiu R; Eichler EE; Shendure J
Nat Biotechnol; 2011 Jan; 29(1):59-63. PubMed ID: 21170042
[TBL] [Abstract][Full Text] [Related]
23. Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications.
Rimmer A; Phan H; Mathieson I; Iqbal Z; Twigg SRF; ; Wilkie AOM; McVean G; Lunter G
Nat Genet; 2014 Aug; 46(8):912-918. PubMed ID: 25017105
[TBL] [Abstract][Full Text] [Related]
24. WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads.
Patterson M; Marschall T; Pisanti N; van Iersel L; Stougie L; Klau GW; Schönhuth A
J Comput Biol; 2015 Jun; 22(6):498-509. PubMed ID: 25658651
[TBL] [Abstract][Full Text] [Related]
25. Gamete binning: chromosome-level and haplotype-resolved genome assembly enabled by high-throughput single-cell sequencing of gamete genomes.
Campoy JA; Sun H; Goel M; Jiao WB; Folz-Donahue K; Wang N; Rubio M; Liu C; Kukat C; Ruiz D; Huettel B; Schneeberger K
Genome Biol; 2020 Dec; 21(1):306. PubMed ID: 33372615
[TBL] [Abstract][Full Text] [Related]
26. Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing.
Selvaraj S; R Dixon J; Bansal V; Ren B
Nat Biotechnol; 2013 Dec; 31(12):1111-8. PubMed ID: 24185094
[TBL] [Abstract][Full Text] [Related]
27. Joint haplotype assembly and genotype calling via sequential Monte Carlo algorithm.
Ahn S; Vikalo H
BMC Bioinformatics; 2015 Jul; 16():223. PubMed ID: 26178880
[TBL] [Abstract][Full Text] [Related]
28. Haplotyping-Assisted Diploid Assembly and Variant Detection with Linked Reads.
Hu Y; Yang C; Zhang L; Zhou X
Methods Mol Biol; 2023; 2590():161-182. PubMed ID: 36335499
[TBL] [Abstract][Full Text] [Related]
29. A reference data set of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree.
Eberle MA; Fritzilas E; Krusche P; Källberg M; Moore BL; Bekritsky MA; Iqbal Z; Chuang HY; Humphray SJ; Halpern AL; Kruglyak S; Margulies EH; McVean G; Bentley DR
Genome Res; 2017 Jan; 27(1):157-164. PubMed ID: 27903644
[TBL] [Abstract][Full Text] [Related]
30. trioPhaser: using Mendelian inheritance logic to improve genomic phasing of trios.
Miller DB; Piccolo SR
BMC Bioinformatics; 2021 Nov; 22(1):559. PubMed ID: 34809557
[TBL] [Abstract][Full Text] [Related]
31. Accurate whole-genome sequencing and haplotyping from 10 to 20 human cells.
Peters BA; Kermani BG; Sparks AB; Alferov O; Hong P; Alexeev A; Jiang Y; Dahl F; Tang YT; Haas J; Robasky K; Zaranek AW; Lee JH; Ball MP; Peterson JE; Perazich H; Yeung G; Liu J; Chen L; Kennemer MI; Pothuraju K; Konvicka K; Tsoupko-Sitnikov M; Pant KP; Ebert JC; Nilsen GB; Baccash J; Halpern AL; Church GM; Drmanac R
Nature; 2012 Jul; 487(7406):190-5. PubMed ID: 22785314
[TBL] [Abstract][Full Text] [Related]
32. Long-read-based single sperm genome sequencing for chromosome-wide haplotype phasing of both SNPs and SVs.
Xie H; Li W; Guo Y; Su X; Chen K; Wen L; Tang F
Nucleic Acids Res; 2023 Aug; 51(15):8020-8034. PubMed ID: 37351613
[TBL] [Abstract][Full Text] [Related]
33. Multi-platform discovery of haplotype-resolved structural variation in human genomes.
Chaisson MJP; Sanders AD; Zhao X; Malhotra A; Porubsky D; Rausch T; Gardner EJ; Rodriguez OL; Guo L; Collins RL; Fan X; Wen J; Handsaker RE; Fairley S; Kronenberg ZN; Kong X; Hormozdiari F; Lee D; Wenger AM; Hastie AR; Antaki D; Anantharaman T; Audano PA; Brand H; Cantsilieris S; Cao H; Cerveira E; Chen C; Chen X; Chin CS; Chong Z; Chuang NT; Lambert CC; Church DM; Clarke L; Farrell A; Flores J; Galeev T; Gorkin DU; Gujral M; Guryev V; Heaton WH; Korlach J; Kumar S; Kwon JY; Lam ET; Lee JE; Lee J; Lee WP; Lee SP; Li S; Marks P; Viaud-Martinez K; Meiers S; Munson KM; Navarro FCP; Nelson BJ; Nodzak C; Noor A; Kyriazopoulou-Panagiotopoulou S; Pang AWC; Qiu Y; Rosanio G; Ryan M; Stütz A; Spierings DCJ; Ward A; Welch AE; Xiao M; Xu W; Zhang C; Zhu Q; Zheng-Bradley X; Lowy E; Yakneen S; McCarroll S; Jun G; Ding L; Koh CL; Ren B; Flicek P; Chen K; Gerstein MB; Kwok PY; Lansdorp PM; Marth GT; Sebat J; Shi X; Bashir A; Ye K; Devine SE; Talkowski ME; Mills RE; Marschall T; Korbel JO; Eichler EE; Lee C
Nat Commun; 2019 Apr; 10(1):1784. PubMed ID: 30992455
[TBL] [Abstract][Full Text] [Related]
34. An efficient and scalable analysis framework for variant extraction and refinement from population-scale DNA sequence data.
Jun G; Wing MK; Abecasis GR; Kang HM
Genome Res; 2015 Jun; 25(6):918-25. PubMed ID: 25883319
[TBL] [Abstract][Full Text] [Related]
35. Decoding Genetic Variations: Communications-Inspired Haplotype Assembly.
Puljiz Z; Vikalo H
IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(3):518-30. PubMed ID: 27295635
[TBL] [Abstract][Full Text] [Related]
36. High throughput barcoding method for genome-scale phasing.
Redin D; Frick T; Aghelpasand H; Käller M; Borgström E; Olsen RA; Ahmadian A
Sci Rep; 2019 Dec; 9(1):18116. PubMed ID: 31792271
[TBL] [Abstract][Full Text] [Related]
37. Towards routine chromosome-scale haplotype-resolved reconstruction in cancer genomics.
Garg S
Nat Commun; 2023 Mar; 14(1):1358. PubMed ID: 36914638
[TBL] [Abstract][Full Text] [Related]
38. Characterization of structural variants with single molecule and hybrid sequencing approaches.
Ritz A; Bashir A; Sindi S; Hsu D; Hajirasouliha I; Raphael BJ
Bioinformatics; 2014 Dec; 30(24):3458-66. PubMed ID: 25355789
[TBL] [Abstract][Full Text] [Related]
39. An accurate clone-based haplotyping method by overlapping pool sequencing.
Li C; Cao C; Tu J; Sun X
Nucleic Acids Res; 2016 Jul; 44(12):e112. PubMed ID: 27095193
[TBL] [Abstract][Full Text] [Related]
40. HapCUT2: A Method for Phasing Genomes Using Experimental Sequence Data.
Bansal V
Methods Mol Biol; 2023; 2590():139-147. PubMed ID: 36335497
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
