These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

355 related articles for article (PubMed ID: 26855363)

  • 1. epiGBS: reference-free reduced representation bisulfite sequencing.
    van Gurp TP; Wagemaker NC; Wouters B; Vergeer P; Ouborg JN; Verhoeven KJ
    Nat Methods; 2016 Apr; 13(4):322-4. PubMed ID: 26855363
    [TBL] [Abstract][Full Text] [Related]  

  • 2. MethGo: a comprehensive tool for analyzing whole-genome bisulfite sequencing data.
    Liao WW; Yen MR; Ju E; Hsu FM; Lam L; Chen PY
    BMC Genomics; 2015; 16 Suppl 12(Suppl 12):S11. PubMed ID: 26680022
    [TBL] [Abstract][Full Text] [Related]  

  • 3. epiGBS2: Improvements and evaluation of highly multiplexed, epiGBS-based reduced representation bisulfite sequencing.
    Gawehns F; Postuma M; van Antro M; Nunn A; Sepers B; Fatma S; van Gurp TP; Wagemaker NCAM; Mateman AC; Milanovic-Ivanovic S; Groβe I; van Oers K; Vergeer P; Verhoeven KJF
    Mol Ecol Resour; 2022 Jul; 22(5):2087-2104. PubMed ID: 35178872
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A trimming-and-retrieving alignment scheme for reduced representation bisulfite sequencing.
    Wang X; Yu X; Zhu W; McCombie WR; Antoniou E; Powers RS; Davidson NO; Li E; Williams J
    Bioinformatics; 2015 Jun; 31(12):2040-2. PubMed ID: 25681254
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A comprehensive evaluation of alignment software for reduced representation bisulfite sequencing data.
    Sun X; Han Y; Zhou L; Chen E; Lu B; Liu Y; Pan X; Cowley AW; Liang M; Wu Q; Lu Y; Liu P
    Bioinformatics; 2018 Aug; 34(16):2715-2723. PubMed ID: 29579198
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comprehensive analysis of DNA methylation data with RnBeads.
    Assenov Y; Müller F; Lutsik P; Walter J; Lengauer T; Bock C
    Nat Methods; 2014 Nov; 11(11):1138-1140. PubMed ID: 25262207
    [TBL] [Abstract][Full Text] [Related]  

  • 7. BS-SNPer: SNP calling in bisulfite-seq data.
    Gao S; Zou D; Mao L; Liu H; Song P; Chen Y; Zhao S; Gao C; Li X; Gao Z; Fang X; Yang H; Ørntoft TF; Sørensen KD; Bolund L
    Bioinformatics; 2015 Dec; 31(24):4006-8. PubMed ID: 26319221
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Whole-Genome Bisulfite Sequencing for the Methylation Analysis of Insect Genomes.
    Gatzmann F; Lyko F
    Methods Mol Biol; 2019; 1858():141-156. PubMed ID: 30414116
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Bioinformatic Analysis of Methylation Patterns Using Bisulfite Sequencing Data.
    Asselman J
    Methods Mol Biol; 2019; 1858():157-175. PubMed ID: 30414117
    [TBL] [Abstract][Full Text] [Related]  

  • 10. BSPAT: a fast online tool for DNA methylation co-occurrence pattern analysis based on high-throughput bisulfite sequencing data.
    Hu K; Ting AH; Li J
    BMC Bioinformatics; 2015 Jul; 16():220. PubMed ID: 26163275
    [TBL] [Abstract][Full Text] [Related]  

  • 11. BS-virus-finder: virus integration calling using bisulfite sequencing data.
    Gao S; Hu X; Xu F; Gao C; Xiong K; Zhao X; Chen H; Zhao S; Wang M; Fu D; Zhao X; Bai J; Mao L; Li B; Wu S; Wang J; Li S; Yang H; Bolund L; Pedersen CNS
    Gigascience; 2018 Jan; 7(1):1-7. PubMed ID: 29267855
    [TBL] [Abstract][Full Text] [Related]  

  • 12. DNA methylation analysis of germ cells by using bisulfite-based sequencing methods.
    Kobayashi H; Kono T
    Methods Mol Biol; 2012; 825():223-35. PubMed ID: 22144248
    [TBL] [Abstract][Full Text] [Related]  

  • 13. BS-Seeker3: ultrafast pipeline for bisulfite sequencing.
    Huang KYY; Huang YJ; Chen PY
    BMC Bioinformatics; 2018 Apr; 19(1):111. PubMed ID: 29614954
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Analysis and Visualization Tool for Targeted Amplicon Bisulfite Sequencing on Ion Torrent Sequencers.
    Pabinger S; Ernst K; Pulverer W; Kallmeyer R; Valdes AM; Metrustry S; Katic D; Nuzzo A; Kriegner A; Vierlinger K; Weinhaeusel A
    PLoS One; 2016; 11(7):e0160227. PubMed ID: 27467908
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Epigenetic Approaches in Non-Model Plants.
    Boquete MT; Wagemaker NCAM; Vergeer P; Mounger J; Richards CL
    Methods Mol Biol; 2020; 2093():203-215. PubMed ID: 32088898
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ViewBS: a powerful toolkit for visualization of high-throughput bisulfite sequencing data.
    Huang X; Zhang S; Li K; Thimmapuram J; Xie S; Wren J
    Bioinformatics; 2018 Feb; 34(4):708-709. PubMed ID: 29087450
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Methodological aspects of whole-genome bisulfite sequencing analysis.
    Adusumalli S; Mohd Omar MF; Soong R; Benoukraf T
    Brief Bioinform; 2015 May; 16(3):369-79. PubMed ID: 24867940
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Genome-Wide Analysis of DNA Methylation in Hematopoietic Cells: DNA Methylation Analysis by WGBS.
    Jeong M; Guzman AG; Goodell MA
    Methods Mol Biol; 2017; 1633():137-149. PubMed ID: 28735485
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Large-Scale Targeted DNA Methylation Analysis Using Bisulfite Padlock Probes.
    Diep D; Plongthongkum N; Zhang K
    Methods Mol Biol; 2018; 1708():365-382. PubMed ID: 29224154
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Targeted bisulfite sequencing of the dynamic DNA methylome.
    Ziller MJ; Stamenova EK; Gu H; Gnirke A; Meissner A
    Epigenetics Chromatin; 2016; 9():55. PubMed ID: 27980681
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 18.