These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

216 related articles for article (PubMed ID: 26886998)

  • 1. Genome-Wide Search for Translated Upstream Open Reading Frames in Arabidopsis Thaliana.
    Hu Q; Merchante C; Stepanova AN; Alonso JM; Heber S
    IEEE Trans Nanobioscience; 2016 Mar; 15(2):148-57. PubMed ID: 26886998
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Identification of Arabidopsis thaliana upstream open reading frames encoding peptide sequences that cause ribosomal arrest.
    Hayashi N; Sasaki S; Takahashi H; Yamashita Y; Naito S; Onouchi H
    Nucleic Acids Res; 2017 Sep; 45(15):8844-8858. PubMed ID: 28637336
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The Minimum Open Reading Frame, AUG-Stop, Induces Boron-Dependent Ribosome Stalling and mRNA Degradation.
    Tanaka M; Sotta N; Yamazumi Y; Yamashita Y; Miwa K; Murota K; Chiba Y; Hirai MY; Akiyama T; Onouchi H; Naito S; Fujiwara T
    Plant Cell; 2016 Nov; 28(11):2830-2849. PubMed ID: 27760805
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Identification of novel Arabidopsis thaliana upstream open reading frames that control expression of the main coding sequences in a peptide sequence-dependent manner.
    Ebina I; Takemoto-Tsutsumi M; Watanabe S; Koyama H; Endo Y; Kimata K; Igarashi T; Murakami K; Kudo R; Ohsumi A; Noh AL; Takahashi H; Naito S; Onouchi H
    Nucleic Acids Res; 2015 Feb; 43(3):1562-76. PubMed ID: 25618853
    [TBL] [Abstract][Full Text] [Related]  

  • 5. uORF-Tools-Workflow for the determination of translation-regulatory upstream open reading frames.
    Scholz A; Eggenhofer F; Gelhausen R; Grüning B; Zarnack K; Brüne B; Backofen R; Schmid T
    PLoS One; 2019; 14(9):e0222459. PubMed ID: 31513641
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Conserved non-AUG uORFs revealed by a novel regression analysis of ribosome profiling data.
    Spealman P; Naik AW; May GE; Kuersten S; Freeberg L; Murphy RF; McManus J
    Genome Res; 2018 Feb; 28(2):214-222. PubMed ID: 29254944
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Regulation of plant translation by upstream open reading frames.
    von Arnim AG; Jia Q; Vaughn JN
    Plant Sci; 2014 Jan; 214():1-12. PubMed ID: 24268158
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genome-wide identification of Arabidopsis non-AUG-initiated upstream ORFs with evolutionarily conserved regulatory sequences that control protein expression levels.
    Hiragori Y; Takahashi H; Karino T; Kaido A; Hayashi N; Sasaki S; Nakao K; Motomura T; Yamashita Y; Naito S; Onouchi H
    Plant Mol Biol; 2023 Jan; 111(1-2):37-55. PubMed ID: 36044152
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Plant transcripts with long or structured upstream open reading frames in the NDL2 5' UTR can escape nonsense-mediated mRNA decay in a reinitiation-independent manner.
    Cymerman MA; Saul H; Farhi R; Vexler K; Gottlieb D; Berezin I; Shaul O
    J Exp Bot; 2023 Jan; 74(1):91-103. PubMed ID: 36169317
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Translational Landscape of Protein-Coding and Non-Protein-Coding RNAs upon Light Exposure in Arabidopsis.
    Kurihara Y; Makita Y; Shimohira H; Fujita T; Iwasaki S; Matsui M
    Plant Cell Physiol; 2020 Mar; 61(3):536-545. PubMed ID: 31794029
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Genome-wide maps of ribosomal occupancy provide insights into adaptive evolution and regulatory roles of uORFs during Drosophila development.
    Zhang H; Dou S; He F; Luo J; Wei L; Lu J
    PLoS Biol; 2018 Jul; 16(7):e2003903. PubMed ID: 30028832
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Translation of upstream open reading frames in a model of neuronal differentiation.
    Rodriguez CM; Chun SY; Mills RE; Todd PK
    BMC Genomics; 2019 May; 20(1):391. PubMed ID: 31109297
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Translational repression of the McKusick-Kaufman syndrome transcript by unique upstream open reading frames encoding mitochondrial proteins with alternative polyadenylation sites.
    Akimoto C; Sakashita E; Kasashima K; Kuroiwa K; Tominaga K; Hamamoto T; Endo H
    Biochim Biophys Acta; 2013 Mar; 1830(3):2728-38. PubMed ID: 23671934
    [TBL] [Abstract][Full Text] [Related]  

  • 14. BAIUCAS: a novel BLAST-based algorithm for the identification of upstream open reading frames with conserved amino acid sequences and its application to the Arabidopsis thaliana genome.
    Takahashi H; Takahashi A; Naito S; Onouchi H
    Bioinformatics; 2012 Sep; 28(17):2231-41. PubMed ID: 22618534
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Identification and characterization of upstream open reading frames (uORF) in the 5' untranslated regions (UTR) of genes in Saccharomyces cerevisiae.
    Zhang Z; Dietrich FS
    Curr Genet; 2005 Aug; 48(2):77-87. PubMed ID: 16012843
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The upstream open reading frame of the Arabidopsis AtMHX gene has a strong impact on transcript accumulation through the nonsense-mediated mRNA decay pathway.
    Saul H; Elharrar E; Gaash R; Eliaz D; Valenci M; Akua T; Avramov M; Frankel N; Berezin I; Gottlieb D; Elazar M; David-Assael O; Tcherkas V; Mizrachi K; Shaul O
    Plant J; 2009 Dec; 60(6):1031-42. PubMed ID: 19754518
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Conservation of uORF repressiveness and sequence features in mouse, human and zebrafish.
    Chew GL; Pauli A; Schier AF
    Nat Commun; 2016 May; 7():11663. PubMed ID: 27216465
    [TBL] [Abstract][Full Text] [Related]  

  • 18. uORF-seqr: A Machine Learning-Based Approach to the Identification of Upstream Open Reading Frames in Yeast.
    Spealman P; Naik A; McManus J
    Methods Mol Biol; 2021; 2252():313-329. PubMed ID: 33765283
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Translational buffering by ribosome stalling in upstream open reading frames.
    Bottorff TA; Park H; Geballe AP; Subramaniam AR
    PLoS Genet; 2022 Oct; 18(10):e1010460. PubMed ID: 36315596
    [TBL] [Abstract][Full Text] [Related]  

  • 20. uORFs: Important
    Zhang T; Wu A; Yue Y; Zhao Y
    Int J Mol Sci; 2020 Aug; 21(17):. PubMed ID: 32872304
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.