185 related articles for article (PubMed ID: 26936210)
1. Population structure of Atlantic mackerel inferred from RAD-seq-derived SNP markers: effects of sequence clustering parameters and hierarchical SNP selection.
Rodríguez-Ezpeleta N; Bradbury IR; Mendibil I; Álvarez P; Cotano U; Irigoien X
Mol Ecol Resour; 2016 Jul; 16(4):991-1001. PubMed ID: 26936210
[TBL] [Abstract][Full Text] [Related]
2. Deriving genotypes from RAD-seq short-read data using Stacks.
Rochette NC; Catchen JM
Nat Protoc; 2017 Dec; 12(12):2640-2659. PubMed ID: 29189774
[TBL] [Abstract][Full Text] [Related]
3. Differential population structuring of two closely related fish species, the mackerel (Scomber scombrus) and the chub mackerel (Scomber japonicus), in the Mediterranean Sea.
Zardoya R; Castilho R; Grande C; Favre-Krey L; Caetano S; Marcato S; Krey G; Patarnello T
Mol Ecol; 2004 Jul; 13(7):1785-98. PubMed ID: 15189203
[TBL] [Abstract][Full Text] [Related]
4. Using a butterflyfish genome as a general tool for RAD-Seq studies in specialized reef fish.
DiBattista JD; Saenz-Agudelo P; Piatek MJ; Wang X; Aranda M; Berumen ML
Mol Ecol Resour; 2017 Nov; 17(6):1330-1341. PubMed ID: 28236665
[TBL] [Abstract][Full Text] [Related]
5. SNP discovery and genotyping using restriction-site-associated DNA sequencing in chickens.
Zhai Z; Zhao W; He C; Yang K; Tang L; Liu S; Zhang Y; Huang Q; Meng H
Anim Genet; 2015 Apr; 46(2):216-9. PubMed ID: 25591076
[TBL] [Abstract][Full Text] [Related]
6. Population genomic analyses from low-coverage RAD-Seq data: a case study on the non-model cucurbit bottle gourd.
Xu P; Xu S; Wu X; Tao Y; Wang B; Wang S; Qin D; Lu Z; Li G
Plant J; 2014 Feb; 77(3):430-42. PubMed ID: 24320550
[TBL] [Abstract][Full Text] [Related]
7. Restriction site-associated DNA sequencing, genotyping error estimation and de novo assembly optimization for population genetic inference.
Mastretta-Yanes A; Arrigo N; Alvarez N; Jorgensen TH; Piñero D; Emerson BC
Mol Ecol Resour; 2015 Jan; 15(1):28-41. PubMed ID: 24916682
[TBL] [Abstract][Full Text] [Related]
8. Double-digest RAD sequencing using Ion Proton semiconductor platform (ddRADseq-ion) with nonmodel organisms.
Recknagel H; Jacobs A; Herzyk P; Elmer KR
Mol Ecol Resour; 2015 Nov; 15(6):1316-29. PubMed ID: 25808755
[TBL] [Abstract][Full Text] [Related]
9. PCR-RFLP analysis of nuclear nontranscribed spacer for mackerel species identification.
Aranishi F
J Agric Food Chem; 2005 Feb; 53(3):508-11. PubMed ID: 15686394
[TBL] [Abstract][Full Text] [Related]
10. Population genomic analysis of model and nonmodel organisms using sequenced RAD tags.
Hohenlohe PA; Catchen J; Cresko WA
Methods Mol Biol; 2012; 888():235-60. PubMed ID: 22665285
[TBL] [Abstract][Full Text] [Related]
11. Phylogeography and population history of Atlantic mackerel (Scomber scombrus L.): a genealogical approach reveals genetic structuring among the eastern Atlantic stocks.
Nesbø CL; Rueness EK; Iversen SA; Skagen DW; Jakobsen KS
Proc Biol Sci; 2000 Feb; 267(1440):281-92. PubMed ID: 10714883
[TBL] [Abstract][Full Text] [Related]
12. Phylogenetic differentiation between Atlantic Scomber colias and Pacific Scomber japonicus based on nuclear DNA sequences.
Infante C; Blanco E; Zuasti E; Crespo A; Manchado M
Genetica; 2007 May; 130(1):1-8. PubMed ID: 16897460
[TBL] [Abstract][Full Text] [Related]
13. Low impact of different SNP panels from two building-loci pipelines on RAD-Seq population genomic metrics: case study on five diverse aquatic species.
Casanova A; Maroso F; Blanco A; Hermida M; Ríos N; García G; Manuzzi A; Zane L; Verissimo A; García-Marín JL; Bouza C; Vera M; Martínez P
BMC Genomics; 2021 Mar; 22(1):150. PubMed ID: 33653268
[TBL] [Abstract][Full Text] [Related]
14. RAD-sequencing for estimating genomic relatedness matrix-based heritability in the wild: A case study in roe deer.
Gervais L; Perrier C; Bernard M; Merlet J; Pemberton JM; Pujol B; Quéméré E
Mol Ecol Resour; 2019 Sep; 19(5):1205-1217. PubMed ID: 31058463
[TBL] [Abstract][Full Text] [Related]
15. Transatlantic secondary contact in Atlantic Salmon, comparing microsatellites, a single nucleotide polymorphism array and restriction-site associated DNA sequencing for the resolution of complex spatial structure.
Bradbury IR; Hamilton LC; Dempson B; Robertson MJ; Bourret V; Bernatchez L; Verspoor E
Mol Ecol; 2015 Oct; 24(20):5130-44. PubMed ID: 26407171
[TBL] [Abstract][Full Text] [Related]
16. Haplotyping RAD loci: an efficient method to filter paralogs and account for physical linkage.
Willis SC; Hollenbeck CM; Puritz JB; Gold JR; Portnoy DS
Mol Ecol Resour; 2017 Sep; 17(5):955-965. PubMed ID: 28042915
[TBL] [Abstract][Full Text] [Related]
17. Development and preliminary evaluation of a genomewide single nucleotide polymorphisms resource generated by RAD-seq for the small yellow croaker (Larimichthys polyactis).
Zhang BD; Xue DX; Wang J; Li YL; Liu BJ; Liu JX
Mol Ecol Resour; 2016 May; 16(3):755-68. PubMed ID: 26439680
[TBL] [Abstract][Full Text] [Related]
18. A highly robust and optimized sequence-based approach for genetic polymorphism discovery and genotyping in large plant populations.
Jiang N; Zhang F; Wu J; Chen Y; Hu X; Fang O; Leach LJ; Wang D; Luo Z
Theor Appl Genet; 2016 Sep; 129(9):1739-57. PubMed ID: 27316437
[TBL] [Abstract][Full Text] [Related]
19. Estimating and accounting for genotyping errors in RAD-seq experiments.
Bresadola L; Link V; Buerkle CA; Lexer C; Wegmann D
Mol Ecol Resour; 2020 Jul; 20(4):856-870. PubMed ID: 32142201
[TBL] [Abstract][Full Text] [Related]
20. SNP discovery and genotyping for evolutionary genetics using RAD sequencing.
Etter PD; Bassham S; Hohenlohe PA; Johnson EA; Cresko WA
Methods Mol Biol; 2011; 772():157-78. PubMed ID: 22065437
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
