545 related articles for article (PubMed ID: 26949424)
1. MSRE-HTPrimer: a high-throughput and genome-wide primer design pipeline optimized for epigenetic research.
Pandey RV; Pulverer W; Kallmeyer R; Beikircher G; Pabinger S; Kriegner A; Weinhäusel A
Clin Epigenetics; 2016; 8():26. PubMed ID: 26949424
[TBL] [Abstract][Full Text] [Related]
2. MSP-HTPrimer: a high-throughput primer design tool to improve assay design for DNA methylation analysis in epigenetics.
Pandey RV; Pulverer W; Kallmeyer R; Beikircher G; Pabinger S; Kriegner A; Weinhäusel A
Clin Epigenetics; 2016; 8():101. PubMed ID: 27688817
[TBL] [Abstract][Full Text] [Related]
3. Multiplexed and Sensitive DNA Methylation Testing Using Methylation-Sensitive Restriction Enzymes "MSRE-qPCR".
Beikircher G; Pulverer W; Hofner M; Noehammer C; Weinhaeusel A
Methods Mol Biol; 2018; 1708():407-424. PubMed ID: 29224156
[TBL] [Abstract][Full Text] [Related]
4. ConservedPrimers 2.0: a high-throughput pipeline for comparative genome referenced intron-flanking PCR primer design and its application in wheat SNP discovery.
You FM; Huo N; Gu YQ; Lazo GR; Dvorak J; Anderson OD
BMC Bioinformatics; 2009 Oct; 10():331. PubMed ID: 19825183
[TBL] [Abstract][Full Text] [Related]
5. PrimerSuite: A High-Throughput Web-Based Primer Design Program for Multiplex Bisulfite PCR.
Lu J; Johnston A; Berichon P; Ru KL; Korbie D; Trau M
Sci Rep; 2017 Jan; 7():41328. PubMed ID: 28117430
[TBL] [Abstract][Full Text] [Related]
6. BatchPrimer3: a high throughput web application for PCR and sequencing primer design.
You FM; Huo N; Gu YQ; Luo MC; Ma Y; Hane D; Lazo GR; Dvorak J; Anderson OD
BMC Bioinformatics; 2008 May; 9():253. PubMed ID: 18510760
[TBL] [Abstract][Full Text] [Related]
7. PRIMEGENS-v2: genome-wide primer design for analyzing DNA methylation patterns of CpG islands.
Srivastava GP; Guo J; Shi H; Xu D
Bioinformatics; 2008 Sep; 24(17):1837-42. PubMed ID: 18579568
[TBL] [Abstract][Full Text] [Related]
8. Erratum to: MSRE-HTPrimer: a high-throughput and genome-wide primer design pipeline optimized for epigenetic research.
Pandey RV; Pulverer W; Kallmeyer R; Beikircher G; Pabinger S; Kriegner A; Weinhäusel A
Clin Epigenetics; 2016; 8():84. PubMed ID: 27493700
[TBL] [Abstract][Full Text] [Related]
9. RExPrimer: an integrated primer designing tool increases PCR effectiveness by avoiding 3' SNP-in-primer and mis-priming from structural variation.
Piriyapongsa J; Ngamphiw C; Assawamakin A; Wangkumhang P; Suwannasri P; Ruangrit U; Agavatpanitch G; Tongsima S
BMC Genomics; 2009 Dec; 10 Suppl 3(Suppl 3):S4. PubMed ID: 19958502
[TBL] [Abstract][Full Text] [Related]
10. Computational tradeoffs in multiplex PCR assay design for SNP genotyping.
Rachlin J; Ding C; Cantor C; Kasif S
BMC Genomics; 2005 Jul; 6():102. PubMed ID: 16042802
[TBL] [Abstract][Full Text] [Related]
11. Enhanced sensitivity of CpG island search and primer design based on predicted CpG island position.
Park HC; Ahn ER; Jung JY; Park JH; Lee JW; Lim SK; Kim W
Forensic Sci Int Genet; 2018 May; 34():134-140. PubMed ID: 29477876
[TBL] [Abstract][Full Text] [Related]
12. MPD: multiplex primer design for next-generation targeted sequencing.
Wingo TS; Kotlar A; Cutler DJ
BMC Bioinformatics; 2017 Jan; 18(1):14. PubMed ID: 28056760
[TBL] [Abstract][Full Text] [Related]
13. URPD: a specific product primer design tool.
Chuang LY; Cheng YH; Yang CH
BMC Res Notes; 2012 Jun; 5():306. PubMed ID: 22713312
[TBL] [Abstract][Full Text] [Related]
14. MethyMer: Design of combinations of specific primers for bisulfite sequencing of complete CpG islands.
Krasnov GS; Melnikova NV; Lakunina VA; Snezhkina AV; Kudryavtseva AV; Dmitriev AA
J Bioinform Comput Biol; 2018 Feb; 16(1):1840004. PubMed ID: 29382254
[TBL] [Abstract][Full Text] [Related]
15. MSRE-PCR for analysis of gene-specific DNA methylation.
Melnikov AA; Gartenhaus RB; Levenson AS; Motchoulskaia NA; Levenson Chernokhvostov VV
Nucleic Acids Res; 2005 Jun; 33(10):e93. PubMed ID: 15944447
[TBL] [Abstract][Full Text] [Related]
16. EasyExonPrimer: automated primer design for exon sequences.
Wu X; Munroe DJ
Appl Bioinformatics; 2006; 5(2):119-20. PubMed ID: 16722777
[TBL] [Abstract][Full Text] [Related]
17. MIRA-seq for DNA methylation analysis of CpG islands.
Jung M; Kadam S; Xiong W; Rauch TA; Jin SG; Pfeifer GP
Epigenomics; 2015 Aug; 7(5):695-706. PubMed ID: 25881900
[TBL] [Abstract][Full Text] [Related]
18. Novel computational methods for increasing PCR primer design effectiveness in directed sequencing.
Li K; Brownley A; Stockwell TB; Beeson K; McIntosh TC; Busam D; Ferriera S; Murphy S; Levy S
BMC Bioinformatics; 2008 Apr; 9():191. PubMed ID: 18405373
[TBL] [Abstract][Full Text] [Related]
19. Design factors that influence PCR amplification success of cross-species primers among 1147 mammalian primer pairs.
Housley DJ; Zalewski ZA; Beckett SE; Venta PJ
BMC Genomics; 2006 Oct; 7():253. PubMed ID: 17029642
[TBL] [Abstract][Full Text] [Related]
20. Epigenome-wide DNA methylation assay reveals placental epigenetic markers for noninvasive fetal single-nucleotide polymorphism genotyping in maternal plasma.
Ou X; Wang H; Qu D; Chen Y; Gao J; Sun H
Transfusion; 2014 Oct; 54(10):2523-33. PubMed ID: 24749853
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]