139 related articles for article (PubMed ID: 26951498)
21. Streaming fragment assignment for real-time analysis of sequencing experiments.
Roberts A; Pachter L
Nat Methods; 2013 Jan; 10(1):71-3. PubMed ID: 23160280
[TBL] [Abstract][Full Text] [Related]
22. Statistical detection of differentially expressed genes based on RNA-seq: from biological to phylogenetic replicates.
Gu X
Brief Bioinform; 2016 Mar; 17(2):243-8. PubMed ID: 26108230
[TBL] [Abstract][Full Text] [Related]
23. DeconRNASeq: a statistical framework for deconvolution of heterogeneous tissue samples based on mRNA-Seq data.
Gong T; Szustakowski JD
Bioinformatics; 2013 Apr; 29(8):1083-5. PubMed ID: 23428642
[TBL] [Abstract][Full Text] [Related]
24. Comparative evaluation of gene set analysis approaches for RNA-Seq data.
Rahmatallah Y; Emmert-Streib F; Glazko G
BMC Bioinformatics; 2014 Dec; 15(1):397. PubMed ID: 25475910
[TBL] [Abstract][Full Text] [Related]
25. Experimental Design and Power Calculation for RNA-seq Experiments.
Wu Z; Wu H
Methods Mol Biol; 2016; 1418():379-90. PubMed ID: 27008024
[TBL] [Abstract][Full Text] [Related]
26. Single-cell mRNA quantification and differential analysis with Census.
Qiu X; Hill A; Packer J; Lin D; Ma YA; Trapnell C
Nat Methods; 2017 Mar; 14(3):309-315. PubMed ID: 28114287
[TBL] [Abstract][Full Text] [Related]
27. Differential correlation for sequencing data.
Siska C; Kechris K
BMC Res Notes; 2017 Jan; 10(1):54. PubMed ID: 28103954
[TBL] [Abstract][Full Text] [Related]
28. Effective detection of variation in single-cell transcriptomes using MATQ-seq.
Sheng K; Cao W; Niu Y; Deng Q; Zong C
Nat Methods; 2017 Mar; 14(3):267-270. PubMed ID: 28092691
[TBL] [Abstract][Full Text] [Related]
29. Guidance for RNA-seq co-expression network construction and analysis: safety in numbers.
Ballouz S; Verleyen W; Gillis J
Bioinformatics; 2015 Jul; 31(13):2123-30. PubMed ID: 25717192
[TBL] [Abstract][Full Text] [Related]
30. A statistical approach for identifying differential distributions in single-cell RNA-seq experiments.
Korthauer KD; Chu LF; Newton MA; Li Y; Thomson J; Stewart R; Kendziorski C
Genome Biol; 2016 Oct; 17(1):222. PubMed ID: 27782827
[TBL] [Abstract][Full Text] [Related]
31. Higher order asymptotics for negative binomial regression inferences from RNA-sequencing data.
Di Y; Emerson SC; Schafer DW; Kimbrel JA; Chang JH
Stat Appl Genet Mol Biol; 2013 Mar; 12(1):49-70. PubMed ID: 23502340
[TBL] [Abstract][Full Text] [Related]
32. Variance component score test for time-course gene set analysis of longitudinal RNA-seq data.
Agniel D; Hejblum BP
Biostatistics; 2017 Oct; 18(4):589-604. PubMed ID: 28334305
[TBL] [Abstract][Full Text] [Related]
33. Near-optimal probabilistic RNA-seq quantification.
Bray NL; Pimentel H; Melsted P; Pachter L
Nat Biotechnol; 2016 May; 34(5):525-7. PubMed ID: 27043002
[TBL] [Abstract][Full Text] [Related]
34. Experimental design and data analysis of Ago-RIP-Seq experiments for the identification of microRNA targets.
Tichy D; Pickl JMA; Benner A; Sültmann H
Brief Bioinform; 2018 Sep; 19(5):918-929. PubMed ID: 28379479
[TBL] [Abstract][Full Text] [Related]
35. Bias and Correction in RNA-seq Data for Marine Species.
Song K; Li L; Zhang G
Mar Biotechnol (NY); 2017 Oct; 19(5):541-550. PubMed ID: 28884399
[TBL] [Abstract][Full Text] [Related]
36. INSPEcT: a computational tool to infer mRNA synthesis, processing and degradation dynamics from RNA- and 4sU-seq time course experiments.
de Pretis S; Kress T; Morelli MJ; Melloni GE; Riva L; Amati B; Pelizzola M
Bioinformatics; 2015 Sep; 31(17):2829-35. PubMed ID: 25957348
[TBL] [Abstract][Full Text] [Related]
37. Joint estimation of isoform expression and isoform-specific read distribution using multisample RNA-Seq data.
Suo C; Calza S; Salim A; Pawitan Y
Bioinformatics; 2014 Feb; 30(4):506-13. PubMed ID: 24307704
[TBL] [Abstract][Full Text] [Related]
38. SplicingCompass: differential splicing detection using RNA-seq data.
Aschoff M; Hotz-Wagenblatt A; Glatting KH; Fischer M; Eils R; König R
Bioinformatics; 2013 May; 29(9):1141-8. PubMed ID: 23449093
[TBL] [Abstract][Full Text] [Related]
39. Differential expression analysis of RNA sequencing data by incorporating non-exonic mapped reads.
Chen HI; Liu Y; Zou Y; Lai Z; Sarkar D; Huang Y; Chen Y
BMC Genomics; 2015; 16 Suppl 7(Suppl 7):S14. PubMed ID: 26099631
[TBL] [Abstract][Full Text] [Related]
40. Identifying differential alternative splicing events from RNA sequencing data using RNASeq-MATS.
Park JW; Tokheim C; Shen S; Xing Y
Methods Mol Biol; 2013; 1038():171-9. PubMed ID: 23872975
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]