BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

268 related articles for article (PubMed ID: 27013732)

  • 21. Quantitative profiling of protein-DNA binding on microarrays.
    Ragoussis J; Field S; Udalova IA
    Methods Mol Biol; 2006; 338():261-80. PubMed ID: 16888364
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Quantitative high-throughput analysis of transcription factor binding specificities.
    Linnell J; Mott R; Field S; Kwiatkowski DP; Ragoussis J; Udalova IA
    Nucleic Acids Res; 2004 Feb; 32(4):e44. PubMed ID: 14990752
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Evolution of the repertoire of nuclear receptor binding sites in genomes.
    Cotnoir-White D; Laperrière D; Mader S
    Mol Cell Endocrinol; 2011 Mar; 334(1-2):76-82. PubMed ID: 21056084
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Universal protein-binding microarrays for the comprehensive characterization of the DNA-binding specificities of transcription factors.
    Berger MF; Bulyk ML
    Nat Protoc; 2009; 4(3):393-411. PubMed ID: 19265799
    [TBL] [Abstract][Full Text] [Related]  

  • 25. High-resolution DNA-binding specificity analysis of yeast transcription factors.
    Zhu C; Byers KJ; McCord RP; Shi Z; Berger MF; Newburger DE; Saulrieta K; Smith Z; Shah MV; Radhakrishnan M; Philippakis AA; Hu Y; De Masi F; Pacek M; Rolfs A; Murthy T; Labaer J; Bulyk ML
    Genome Res; 2009 Apr; 19(4):556-66. PubMed ID: 19158363
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Novel variants in ZNF34 and other brain-expressed transcription factors are shared among early-onset MDD relatives.
    Subaran RL; Odgerel Z; Swaminathan R; Glatt CE; Weissman MM
    Am J Med Genet B Neuropsychiatr Genet; 2016 Apr; 171B(3):333-41. PubMed ID: 26823146
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Speed-Specificity Trade-Offs in the Transcription Factors Search for Their Genomic Binding Sites.
    Jana T; Brodsky S; Barkai N
    Trends Genet; 2021 May; 37(5):421-432. PubMed ID: 33414013
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Disease-associated non-coding variants alter NKX2-5 DNA-binding affinity.
    Peña-Martínez EG; Rivera-Madera A; Pomales-Matos DA; Sanabria-Alberto L; Rosario-Cañuelas BM; Rodríguez-Ríos JM; Carrasquillo-Dones EA; Rodríguez-Martínez JA
    Biochim Biophys Acta Gene Regul Mech; 2023 Mar; 1866(1):194906. PubMed ID: 36690178
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Rare genetic variation at transcription factor binding sites modulates local DNA methylation profiles.
    Martin-Trujillo A; Patel N; Richter F; Jadhav B; Garg P; Morton SU; McKean DM; DePalma SR; Goldmuntz E; Gruber D; Kim R; Newburger JW; Porter GA; Giardini A; Bernstein D; Tristani-Firouzi M; Seidman JG; Seidman CE; Chung WK; Gelb BD; Sharp AJ
    PLoS Genet; 2020 Nov; 16(11):e1009189. PubMed ID: 33216750
    [TBL] [Abstract][Full Text] [Related]  

  • 30. The functional consequences of variation in transcription factor binding.
    Cusanovich DA; Pavlovic B; Pritchard JK; Gilad Y
    PLoS Genet; 2014 Mar; 10(3):e1004226. PubMed ID: 24603674
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Annotations capturing cell type-specific TF binding explain a large fraction of disease heritability.
    van de Geijn B; Finucane H; Gazal S; Hormozdiari F; Amariuta T; Liu X; Gusev A; Loh PR; Reshef Y; Kichaev G; Raychauduri S; Price AL
    Hum Mol Genet; 2020 May; 29(7):1057-1067. PubMed ID: 31595288
    [TBL] [Abstract][Full Text] [Related]  

  • 32. An equilibrium partitioning model connecting gene expression and cis-motif content.
    Mellor J; DeLisi C
    Bioinformatics; 2006 Jul; 22(14):e368-74. PubMed ID: 16873495
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Genic intolerance to functional variation and the interpretation of personal genomes.
    Petrovski S; Wang Q; Heinzen EL; Allen AS; Goldstein DB
    PLoS Genet; 2013; 9(8):e1003709. PubMed ID: 23990802
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Molecular and structural considerations of TF-DNA binding for the generation of biologically meaningful and accurate phylogenetic footprinting analysis: the LysR-type transcriptional regulator family as a study model.
    Oliver P; Peralta-Gil M; Tabche ML; Merino E
    BMC Genomics; 2016 Aug; 17(1):686. PubMed ID: 27567672
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Coordinated effects of sequence variation on DNA binding, chromatin structure, and transcription.
    Kilpinen H; Waszak SM; Gschwind AR; Raghav SK; Witwicki RM; Orioli A; Migliavacca E; Wiederkehr M; Gutierrez-Arcelus M; Panousis NI; Yurovsky A; Lappalainen T; Romano-Palumbo L; Planchon A; Bielser D; Bryois J; Padioleau I; Udin G; Thurnheer S; Hacker D; Core LJ; Lis JT; Hernandez N; Reymond A; Deplancke B; Dermitzakis ET
    Science; 2013 Nov; 342(6159):744-7. PubMed ID: 24136355
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Protein binding microarrays for the characterization of DNA-protein interactions.
    Bulyk ML
    Adv Biochem Eng Biotechnol; 2007; 104():65-85. PubMed ID: 17290819
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Reducing the exome search space for mendelian diseases using genetic linkage analysis of exome genotypes.
    Smith KR; Bromhead CJ; Hildebrand MS; Shearer AE; Lockhart PJ; Najmabadi H; Leventer RJ; McGillivray G; Amor DJ; Smith RJ; Bahlo M
    Genome Biol; 2011 Sep; 12(9):R85. PubMed ID: 21917141
    [TBL] [Abstract][Full Text] [Related]  

  • 38. DNA binding specificity determinants in MADS-box transcription factors.
    Nurrish SJ; Treisman R
    Mol Cell Biol; 1995 Aug; 15(8):4076-85. PubMed ID: 7623803
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Conservation and regulatory associations of a wide affinity range of mouse transcription factor binding sites.
    Jaeger SA; Chan ET; Berger MF; Stottmann R; Hughes TR; Bulyk ML
    Genomics; 2010 Apr; 95(4):185-95. PubMed ID: 20079828
    [TBL] [Abstract][Full Text] [Related]  

  • 40. A community-based resource for automatic exome variant-calling and annotation in Mendelian disorders.
    Mutarelli M; Marwah V; Rispoli R; Carrella D; Dharmalingam G; Oliva G; di Bernardo D
    BMC Genomics; 2014; 15 Suppl 3(Suppl 3):S5. PubMed ID: 25078076
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 14.