These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. MINCE-Seq: Mapping In Vivo Nascent Chromatin with EdU and Sequencing. Ramachandran S; Henikoff S Methods Mol Biol; 2018; 1832():159-168. PubMed ID: 30073526 [TBL] [Abstract][Full Text] [Related]
3. nucMACC: An MNase-seq pipeline to identify structurally altered nucleosomes in the genome. Wernig-Zorc S; Kugler F; Schmutterer L; Räß P; Hausmann C; Holzinger S; Längst G; Schwartz U Sci Adv; 2024 Jul; 10(27):eadm9740. PubMed ID: 38959309 [TBL] [Abstract][Full Text] [Related]
4. Nucleosome free regions in yeast promoters result from competitive binding of transcription factors that interact with chromatin modifiers. Ozonov EA; van Nimwegen E PLoS Comput Biol; 2013; 9(8):e1003181. PubMed ID: 23990766 [TBL] [Abstract][Full Text] [Related]
5. Epigenetic pioneering by SWI/SNF family remodelers. Ahmad K; Brahma S; Henikoff S Mol Cell; 2024 Jan; 84(2):194-201. PubMed ID: 38016477 [TBL] [Abstract][Full Text] [Related]
6. Changing the DNA landscape: putting a SPN on chromatin. Formosa T Curr Top Microbiol Immunol; 2003; 274():171-201. PubMed ID: 12596908 [TBL] [Abstract][Full Text] [Related]
7. GAGA factor maintains nucleosome-free regions and has a role in RNA polymerase II recruitment to promoters. Fuda NJ; Guertin MJ; Sharma S; Danko CG; Martins AL; Siepel A; Lis JT PLoS Genet; 2015 Mar; 11(3):e1005108. PubMed ID: 25815464 [TBL] [Abstract][Full Text] [Related]
8. Zelda overcomes the high intrinsic nucleosome barrier at enhancers during Drosophila zygotic genome activation. Sun Y; Nien CY; Chen K; Liu HY; Johnston J; Zeitlinger J; Rushlow C Genome Res; 2015 Nov; 25(11):1703-14. PubMed ID: 26335633 [TBL] [Abstract][Full Text] [Related]
9. Establishment of a promoter-based chromatin architecture on recently replicated DNA can accommodate variable inter-nucleosome spacing. Fennessy RT; Owen-Hughes T Nucleic Acids Res; 2016 Sep; 44(15):7189-203. PubMed ID: 27106059 [TBL] [Abstract][Full Text] [Related]
10. RNA polymerase II promotes the organization of chromatin following DNA replication. Bandau S; Alvarez V; Jiang H; Graff S; Sundaramoorthy R; Gierlinski M; Toman M; Owen-Hughes T; Sidoli S; Lamond A; Alabert C EMBO Rep; 2024 Mar; 25(3):1387-1414. PubMed ID: 38347224 [TBL] [Abstract][Full Text] [Related]
12. RNA polymerase I (Pol I) passage through nucleosomes depends on Pol I subunits binding its lobe structure. Merkl PE; Pilsl M; Fremter T; Schwank K; Engel C; Längst G; Milkereit P; Griesenbeck J; Tschochner H J Biol Chem; 2020 Apr; 295(15):4782-4795. PubMed ID: 32060094 [TBL] [Abstract][Full Text] [Related]
13. Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci. Petesch SJ; Lis JT Cell; 2008 Jul; 134(1):74-84. PubMed ID: 18614012 [TBL] [Abstract][Full Text] [Related]
14. The impact of the HIRA histone chaperone upon global nucleosome architecture. Gal C; Moore KM; Paszkiewicz K; Kent NA; Whitehall SK Cell Cycle; 2015; 14(1):123-34. PubMed ID: 25602522 [TBL] [Abstract][Full Text] [Related]