304 related articles for article (PubMed ID: 27100883)
21. Genome scale metabolic modeling of cancer.
Nilsson A; Nielsen J
Metab Eng; 2017 Sep; 43(Pt B):103-112. PubMed ID: 27825806
[TBL] [Abstract][Full Text] [Related]
22. Continuous modeling of metabolic networks with gene regulation in yeast and in vivo determination of rate parameters.
Moisset P; Vaisman D; Cintolesi A; Urrutia J; Rapaport I; Andrews BA; Asenjo JA
Biotechnol Bioeng; 2012 Sep; 109(9):2325-39. PubMed ID: 22447363
[TBL] [Abstract][Full Text] [Related]
23. Inference of gene regulatory networks with multi-objective cellular genetic algorithm.
García-Nieto J; Nebro AJ; Aldana-Montes JF
Comput Biol Chem; 2019 Jun; 80():409-418. PubMed ID: 31128452
[TBL] [Abstract][Full Text] [Related]
24. Personalized whole-body models integrate metabolism, physiology, and the gut microbiome.
Thiele I; Sahoo S; Heinken A; Hertel J; Heirendt L; Aurich MK; Fleming RM
Mol Syst Biol; 2020 May; 16(5):e8982. PubMed ID: 32463598
[TBL] [Abstract][Full Text] [Related]
25. Predicting metabolic fluxes from omics data via machine learning: Moving from knowledge-driven towards data-driven approaches.
Gonçalves DM; Henriques R; Costa RS
Comput Struct Biotechnol J; 2023; 21():4960-4973. PubMed ID: 37876626
[TBL] [Abstract][Full Text] [Related]
26. Flux balance analysis in the era of metabolomics.
Lee JM; Gianchandani EP; Papin JA
Brief Bioinform; 2006 Jun; 7(2):140-50. PubMed ID: 16772264
[TBL] [Abstract][Full Text] [Related]
27. An insight to flux-balance analysis for biochemical networks.
Anand S; Mukherjee K; Padmanabhan P
Biotechnol Genet Eng Rev; 2020 Apr; 36(1):32-55. PubMed ID: 33292061
[TBL] [Abstract][Full Text] [Related]
28. Modelling microbial metabolic rewiring during growth in a complex medium.
Fondi M; Bosi E; Presta L; Natoli D; Fani R
BMC Genomics; 2016 Nov; 17(1):970. PubMed ID: 27881075
[TBL] [Abstract][Full Text] [Related]
29. Optimization of Multi-Omic Genome-Scale Models: Methodologies, Hands-on Tutorial, and Perspectives.
Vijayakumar S; Conway M; Lió P; Angione C
Methods Mol Biol; 2018; 1716():389-408. PubMed ID: 29222764
[TBL] [Abstract][Full Text] [Related]
30. Dynamic flux balance analysis of diauxic growth in Escherichia coli.
Mahadevan R; Edwards JS; Doyle FJ
Biophys J; 2002 Sep; 83(3):1331-40. PubMed ID: 12202358
[TBL] [Abstract][Full Text] [Related]
31. Sequencing and beyond: integrating molecular 'omics' for microbial community profiling.
Franzosa EA; Hsu T; Sirota-Madi A; Shafquat A; Abu-Ali G; Morgan XC; Huttenhower C
Nat Rev Microbiol; 2015 Jun; 13(6):360-72. PubMed ID: 25915636
[TBL] [Abstract][Full Text] [Related]
32. Integrating proteomic or transcriptomic data into metabolic models using linear bound flux balance analysis.
Tian M; Reed JL
Bioinformatics; 2018 Nov; 34(22):3882-3888. PubMed ID: 29878053
[TBL] [Abstract][Full Text] [Related]
33. The application of flux balance analysis in systems biology.
Gianchandani EP; Chavali AK; Papin JA
Wiley Interdiscip Rev Syst Biol Med; 2010; 2(3):372-382. PubMed ID: 20836035
[TBL] [Abstract][Full Text] [Related]
34. Genome-level transcription data of Yersinia pestis analyzed with a new metabolic constraint-based approach.
Navid A; Almaas E
BMC Syst Biol; 2012 Dec; 6():150. PubMed ID: 23216785
[TBL] [Abstract][Full Text] [Related]
35. Omics-Based Strategies in Precision Medicine: Toward a Paradigm Shift in Inborn Errors of Metabolism Investigations.
Tebani A; Afonso C; Marret S; Bekri S
Int J Mol Sci; 2016 Sep; 17(9):. PubMed ID: 27649151
[TBL] [Abstract][Full Text] [Related]
36. CEBS object model for systems biology data, SysBio-OM.
Xirasagar S; Gustafson S; Merrick BA; Tomer KB; Stasiewicz S; Chan DD; Yost KJ; Yates JR; Sumner S; Xiao N; Waters MD
Bioinformatics; 2004 Sep; 20(13):2004-15. PubMed ID: 15044233
[TBL] [Abstract][Full Text] [Related]
37. Predicting internal cell fluxes at sub-optimal growth.
Schultz A; Qutub AA
BMC Syst Biol; 2015 Apr; 9():18. PubMed ID: 25890056
[TBL] [Abstract][Full Text] [Related]
38. Improving the accuracy of flux balance analysis through the implementation of carbon availability constraints for intracellular reactions.
Lularevic M; Racher AJ; Jaques C; Kiparissides A
Biotechnol Bioeng; 2019 Sep; 116(9):2339-2352. PubMed ID: 31112296
[TBL] [Abstract][Full Text] [Related]
39. Flux analysis and metabolomics for systematic metabolic engineering of microorganisms.
Toya Y; Shimizu H
Biotechnol Adv; 2013 Nov; 31(6):818-26. PubMed ID: 23680193
[TBL] [Abstract][Full Text] [Related]
40. TIGER: Toolbox for integrating genome-scale metabolic models, expression data, and transcriptional regulatory networks.
Jensen PA; Lutz KA; Papin JA
BMC Syst Biol; 2011 Sep; 5():147. PubMed ID: 21943338
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
