518 related articles for article (PubMed ID: 27107716)
1. Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation.
Čuklina J; Hahn J; Imakaev M; Omasits U; Förstner KU; Ljubimov N; Goebel M; Pessi G; Fischer HM; Ahrens CH; Gelfand MS; Evguenieva-Hackenberg E
BMC Genomics; 2016 Apr; 17():302. PubMed ID: 27107716
[TBL] [Abstract][Full Text] [Related]
2. Genome-wide identification of transcriptional start sites in the haloarchaeon Haloferax volcanii based on differential RNA-Seq (dRNA-Seq).
Babski J; Haas KA; Näther-Schindler D; Pfeiffer F; Förstner KU; Hammelmann M; Hilker R; Becker A; Sharma CM; Marchfelder A; Soppa J
BMC Genomics; 2016 Aug; 17(1):629. PubMed ID: 27519343
[TBL] [Abstract][Full Text] [Related]
3. Genome wide transcription start sites analysis of Xanthomonas campestris pv. campestris B100 with insights into the gum gene cluster directing the biosynthesis of the exopolysaccharide xanthan.
Alkhateeb RS; Vorhölter FJ; Rückert C; Mentz A; Wibberg D; Hublik G; Niehaus K; Pühler A
J Biotechnol; 2016 May; 225():18-28. PubMed ID: 26975844
[TBL] [Abstract][Full Text] [Related]
4. Genome-Wide Analysis of the Transcription Start Sites and Promoter Motifs of Phytoplasmas.
Nijo T; Neriya Y; Koinuma H; Iwabuchi N; Kitazawa Y; Tanno K; Okano Y; Maejima K; Yamaji Y; Oshima K; Namba S
DNA Cell Biol; 2017 Dec; 36(12):1081-1092. PubMed ID: 29039971
[TBL] [Abstract][Full Text] [Related]
5. Transcriptome analysis of thermophilic methylotrophic Bacillus methanolicus MGA3 using RNA-sequencing provides detailed insights into its previously uncharted transcriptional landscape.
Irla M; Neshat A; Brautaset T; Rückert C; Kalinowski J; Wendisch VF
BMC Genomics; 2015 Feb; 16(1):73. PubMed ID: 25758049
[TBL] [Abstract][Full Text] [Related]
6. Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E. coli.
Mendoza-Vargas A; Olvera L; Olvera M; Grande R; Vega-Alvarado L; Taboada B; Jimenez-Jacinto V; Salgado H; Juárez K; Contreras-Moreira B; Huerta AM; Collado-Vides J; Morett E
PLoS One; 2009 Oct; 4(10):e7526. PubMed ID: 19838305
[TBL] [Abstract][Full Text] [Related]
7. An integrated proteomics and transcriptomics reference data set provides new insights into the Bradyrhizobium japonicum bacteroid metabolism in soybean root nodules.
Delmotte N; Ahrens CH; Knief C; Qeli E; Koch M; Fischer HM; Vorholt JA; Hennecke H; Pessi G
Proteomics; 2010 Apr; 10(7):1391-400. PubMed ID: 20104621
[TBL] [Abstract][Full Text] [Related]
8. Genome-wide identification and characterization of transcription start sites and promoters in the tunicate Ciona intestinalis.
Yokomori R; Shimai K; Nishitsuji K; Suzuki Y; Kusakabe TG; Nakai K
Genome Res; 2016 Jan; 26(1):140-50. PubMed ID: 26668163
[TBL] [Abstract][Full Text] [Related]
9. TSS-EMOTE, a refined protocol for a more complete and less biased global mapping of transcription start sites in bacterial pathogens.
Prados J; Linder P; Redder P
BMC Genomics; 2016 Nov; 17(1):849. PubMed ID: 27806702
[TBL] [Abstract][Full Text] [Related]
10. Differential RNA-seq (dRNA-seq) for annotation of transcriptional start sites and small RNAs in Helicobacter pylori.
Bischler T; Tan HS; Nieselt K; Sharma CM
Methods; 2015 Sep; 86():89-101. PubMed ID: 26091613
[TBL] [Abstract][Full Text] [Related]
11. One of two hemN genes in Bradyrhizobium japonicum is functional during anaerobic growth and in symbiosis.
Fischer HM; Velasco L; Delgado MJ; Bedmar EJ; Schären S; Zingg D; Göttfert M; Hennecke H
J Bacteriol; 2001 Feb; 183(4):1300-11. PubMed ID: 11157943
[TBL] [Abstract][Full Text] [Related]
12. Genome-wide determination of transcription start sites reveals new insights into promoter structures in the actinomycete Corynebacterium glutamicum.
Albersmeier A; Pfeifer-Sancar K; Rückert C; Kalinowski J
J Biotechnol; 2017 Sep; 257():99-109. PubMed ID: 28412515
[TBL] [Abstract][Full Text] [Related]
13. A role for Bradyrhizobium japonicum ECF16 sigma factor EcfS in the formation of a functional symbiosis with soybean.
Stockwell SB; Reutimann L; Guerinot ML
Mol Plant Microbe Interact; 2012 Jan; 25(1):119-28. PubMed ID: 21879796
[TBL] [Abstract][Full Text] [Related]
14. Global identification of transcription start sites in the genome of Apis mellifera using 5'LongSAGE.
Zheng H; Sun L; Peng W; Shen Y; Wang Y; Xu B; Gu W; Chen S; Huang Z; Wang S
J Exp Zool B Mol Dev Evol; 2011 Nov; 316(7):500-14. PubMed ID: 21695780
[TBL] [Abstract][Full Text] [Related]
15. TSSer: an automated method to identify transcription start sites in prokaryotic genomes from differential RNA sequencing data.
Jorjani H; Zavolan M
Bioinformatics; 2014 Apr; 30(7):971-4. PubMed ID: 24371151
[TBL] [Abstract][Full Text] [Related]
16. Small RNAs of the Bradyrhizobium/Rhodopseudomonas lineage and their analysis.
Madhugiri R; Pessi G; Voss B; Hahn J; Sharma CM; Reinhardt R; Vogel J; Hess WR; Fischer HM; Evguenieva-Hackenberg E
RNA Biol; 2012 Jan; 9(1):47-58. PubMed ID: 22258152
[TBL] [Abstract][Full Text] [Related]
17. High-throughput detection of RNA processing in bacteria.
Gill EE; Chan LS; Winsor GL; Dobson N; Lo R; Ho Sui SJ; Dhillon BK; Taylor PK; Shrestha R; Spencer C; Hancock REW; Unrau PJ; Brinkman FSL
BMC Genomics; 2018 Mar; 19(1):223. PubMed ID: 29587634
[TBL] [Abstract][Full Text] [Related]
18. Genome-wide analysis of core promoter structures in Schizosaccharomyces pombe with DeepCAGE.
Li H; Hou J; Bai L; Hu C; Tong P; Kang Y; Zhao X; Shao Z
RNA Biol; 2015; 12(5):525-37. PubMed ID: 25747261
[TBL] [Abstract][Full Text] [Related]
19. Identification of active miRNA promoters from nuclear run-on RNA sequencing.
Liu Q; Wang J; Zhao Y; Li CI; Stengel KR; Acharya P; Johnston G; Hiebert SW; Shyr Y
Nucleic Acids Res; 2017 Jul; 45(13):e121. PubMed ID: 28460090
[TBL] [Abstract][Full Text] [Related]
20. Genome-wide transcript analysis of Bradyrhizobium japonicum bacteroids in soybean root nodules.
Pessi G; Ahrens CH; Rehrauer H; Lindemann A; Hauser F; Fischer HM; Hennecke H
Mol Plant Microbe Interact; 2007 Nov; 20(11):1353-63. PubMed ID: 17977147
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
