125 related articles for article (PubMed ID: 27153686)
1. MOLGENIS/connect: a system for semi-automatic integration of heterogeneous phenotype data with applications in biobanks.
Pang C; van Enckevort D; de Haan M; Kelpin F; Jetten J; Hendriksen D; de Boer T; Charbon B; Winder E; van der Velde KJ; Doiron D; Fortier I; Hillege H; Swertz MA
Bioinformatics; 2016 Jul; 32(14):2176-83. PubMed ID: 27153686
[TBL] [Abstract][Full Text] [Related]
2. BiobankUniverse: automatic matchmaking between datasets for biobank data discovery and integration.
Pang C; Kelpin F; van Enckevort D; Eklund N; Silander K; Hendriksen D; de Haan M; Jetten J; de Boer T; Charbon B; Holub P; Hillege H; Swertz MA
Bioinformatics; 2017 Nov; 33(22):3627-3634. PubMed ID: 29036577
[TBL] [Abstract][Full Text] [Related]
3. BiobankConnect: software to rapidly connect data elements for pooled analysis across biobanks using ontological and lexical indexing.
Pang C; Hendriksen D; Dijkstra M; van der Velde KJ; Kuiper J; Hillege HL; Swertz MA
J Am Med Inform Assoc; 2015 Jan; 22(1):65-75. PubMed ID: 25361575
[TBL] [Abstract][Full Text] [Related]
4. MOLGENIS research: advanced bioinformatics data software for non-bioinformaticians.
van der Velde KJ; Imhann F; Charbon B; Pang C; van Enckevort D; Slofstra M; Barbieri R; Alberts R; Hendriksen D; Kelpin F; de Haan M; de Boer T; Haakma S; Stroomberg C; Scholtens S; van de Geijn GJ; Festen EAM; Weersma RK; Swertz MA
Bioinformatics; 2019 Mar; 35(6):1076-1078. PubMed ID: 30165396
[TBL] [Abstract][Full Text] [Related]
5. The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button.
Swertz MA; Dijkstra M; Adamusiak T; van der Velde JK; Kanterakis A; Roos ET; Lops J; Thorisson GA; Arends D; Byelas G; Muilu J; Brookes AJ; de Brock EO; Jansen RC; Parkinson H
BMC Bioinformatics; 2010 Dec; 11 Suppl 12(Suppl 12):S12. PubMed ID: 21210979
[TBL] [Abstract][Full Text] [Related]
6. SORTA: a system for ontology-based re-coding and technical annotation of biomedical phenotype data.
Pang C; Sollie A; Sijtsma A; Hendriksen D; Charbon B; de Haan M; de Boer T; Kelpin F; Jetten J; van der Velde JK; Smidt N; Sijmons R; Hillege H; Swertz MA
Database (Oxford); 2015; 2015():. PubMed ID: 26385205
[TBL] [Abstract][Full Text] [Related]
7. AlgoRun: a Docker-based packaging system for platform-agnostic implemented algorithms.
Hosny A; Vera-Licona P; Laubenbacher R; Favre T
Bioinformatics; 2016 Aug; 32(15):2396-8. PubMed ID: 27153722
[TBL] [Abstract][Full Text] [Related]
8. Molgenis-impute: imputation pipeline in a box.
Kanterakis A; Deelen P; van Dijk F; Byelas H; Dijkstra M; Swertz MA
BMC Res Notes; 2015 Aug; 8():359. PubMed ID: 26286716
[TBL] [Abstract][Full Text] [Related]
9. xQTL workbench: a scalable web environment for multi-level QTL analysis.
Arends D; van der Velde KJ; Prins P; Broman KW; Möller S; Jansen RC; Swertz MA
Bioinformatics; 2012 Apr; 28(7):1042-4. PubMed ID: 22308096
[TBL] [Abstract][Full Text] [Related]
10. SATORI: a system for ontology-guided visual exploration of biomedical data repositories.
Lekschas F; Gehlenborg N
Bioinformatics; 2018 Apr; 34(7):1200-1207. PubMed ID: 29186292
[TBL] [Abstract][Full Text] [Related]
11. OntoCAT--simple ontology search and integration in Java, R and REST/JavaScript.
Adamusiak T; Burdett T; Kurbatova N; Joeri van der Velde K; Abeygunawardena N; Antonakaki D; Kapushesky M; Parkinson H; Swertz MA
BMC Bioinformatics; 2011 May; 12():218. PubMed ID: 21619703
[TBL] [Abstract][Full Text] [Related]
12. OpenStructure: a flexible software framework for computational structural biology.
Biasini M; Mariani V; Haas J; Scheuber S; Schenk AD; Schwede T; Philippsen A
Bioinformatics; 2010 Oct; 26(20):2626-8. PubMed ID: 20733063
[TBL] [Abstract][Full Text] [Related]
13. New workflow for classification of genetic variants' pathogenicity applied to hereditary recurrent fevers by the International Study Group for Systemic Autoinflammatory Diseases (INSAID).
Van Gijn ME; Ceccherini I; Shinar Y; Carbo EC; Slofstra M; Arostegui JI; Sarrabay G; Rowczenio D; Omoyımnı E; Balci-Peynircioglu B; Hoffman HM; Milhavet F; Swertz MA; Touitou I
J Med Genet; 2018 Aug; 55(8):530-537. PubMed ID: 29599418
[TBL] [Abstract][Full Text] [Related]
14. OVA: integrating molecular and physical phenotype data from multiple biomedical domain ontologies with variant filtering for enhanced variant prioritization.
Antanaviciute A; Watson CM; Harrison SM; Lascelles C; Crinnion L; Markham AF; Bonthron DT; Carr IM
Bioinformatics; 2015 Dec; 31(23):3822-9. PubMed ID: 26272982
[TBL] [Abstract][Full Text] [Related]
15. Extending gene ontology with gene association networks.
Peng J; Wang T; Wang J; Wang Y; Chen J
Bioinformatics; 2016 Apr; 32(8):1185-94. PubMed ID: 26644414
[TBL] [Abstract][Full Text] [Related]
16. A sample storage management system for biobanks.
Voegele C; Alteyrac L; Caboux E; Smans M; Lesueur F; Le Calvez-Kelm F; Hainaut P
Bioinformatics; 2010 Nov; 26(21):2798-800. PubMed ID: 20807837
[TBL] [Abstract][Full Text] [Related]
17. A Cytoscape app for motif enumeration with ISMAGS.
Van Parys T; Melckenbeeck I; Houbraken M; Audenaert P; Colle D; Pickavet M; Demeester P; Van de Peer Y
Bioinformatics; 2017 Feb; 33(3):461-463. PubMed ID: 28158465
[TBL] [Abstract][Full Text] [Related]
18. SAIL--a software system for sample and phenotype availability across biobanks and cohorts.
Gostev M; Fernandez-Banet J; Rung J; Dietrich J; Prokopenko I; Ripatti S; McCarthy MI; Brazma A; Krestyaninova M
Bioinformatics; 2011 Feb; 27(4):589-91. PubMed ID: 21169373
[TBL] [Abstract][Full Text] [Related]
19. Idéfix: identifying accidental sample mix-ups in biobanks using polygenic scores.
Warmerdam R; Lanting P; ; Deelen P; Franke L
Bioinformatics; 2022 Jan; 38(4):1059-1066. PubMed ID: 34792549
[TBL] [Abstract][Full Text] [Related]
20. BioJava 5: A community driven open-source bioinformatics library.
Lafita A; Bliven S; Prlić A; Guzenko D; Rose PW; Bradley A; Pavan P; Myers-Turnbull D; Valasatava Y; Heuer M; Larson M; Burley SK; Duarte JM
PLoS Comput Biol; 2019 Feb; 15(2):e1006791. PubMed ID: 30735498
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
