These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

180 related articles for article (PubMed ID: 27158917)

  • 1. Interactive Exploration, Analysis, and Visualization of Complex Phenome-Genome Datasets with ASPIREdb.
    Tan PP; Rogic S; Zoubarev A; McDonald C; Lui F; Charathsandran G; Jacobson M; Belmadani M; Leong J; Van Rossum T; Portales-Casamar E; Qiao Y; Calli K; Liu X; Hudson M; Rajcan-Separovic E; Lewis MS; Pavlidis P
    Hum Mutat; 2016 Aug; 37(8):719-26. PubMed ID: 27158917
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A community-based resource for automatic exome variant-calling and annotation in Mendelian disorders.
    Mutarelli M; Marwah V; Rispoli R; Carrella D; Dharmalingam G; Oliva G; di Bernardo D
    BMC Genomics; 2014; 15 Suppl 3(Suppl 3):S5. PubMed ID: 25078076
    [TBL] [Abstract][Full Text] [Related]  

  • 3. JWES: a new pipeline for whole genome/exome sequence data processing, management, and gene-variant discovery, annotation, prediction, and genotyping.
    Ahmed Z; Renart EG; Mishra D; Zeeshan S
    FEBS Open Bio; 2021 Sep; 11(9):2441-2452. PubMed ID: 34370400
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The Clinical Genome and Ancestry Report: An interactive web application for prioritizing clinically implicated variants from genome sequencing data with ancestry composition.
    Lee IH; Negron JA; Hernandez-Ferrer C; Alvarez WJ; Mandl KD; Kong SW
    Hum Mutat; 2020 Feb; 41(2):387-396. PubMed ID: 31691385
    [TBL] [Abstract][Full Text] [Related]  

  • 5. mirVAFC: A Web Server for Prioritizations of Pathogenic Sequence Variants from Exome Sequencing Data via Classifications.
    Li Z; Liu Z; Jiang Y; Chen D; Ran X; Sun ZS; Wu J
    Hum Mutat; 2017 Jan; 38(1):25-33. PubMed ID: 27676360
    [TBL] [Abstract][Full Text] [Related]  

  • 6. MSeqDR: A Centralized Knowledge Repository and Bioinformatics Web Resource to Facilitate Genomic Investigations in Mitochondrial Disease.
    Shen L; Diroma MA; Gonzalez M; Navarro-Gomez D; Leipzig J; Lott MT; van Oven M; Wallace DC; Muraresku CC; Zolkipli-Cunningham Z; Chinnery PF; Attimonelli M; Zuchner S; Falk MJ; Gai X
    Hum Mutat; 2016 Jun; 37(6):540-548. PubMed ID: 26919060
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Cruxome: a powerful tool for annotating, interpreting and reporting genetic variants.
    Han Q; Yang Y; Wu S; Liao Y; Zhang S; Liang H; Cram DS; Zhang Y
    BMC Genomics; 2021 Jun; 22(1):407. PubMed ID: 34082700
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A survey of tools for variant analysis of next-generation genome sequencing data.
    Pabinger S; Dander A; Fischer M; Snajder R; Sperk M; Efremova M; Krabichler B; Speicher MR; Zschocke J; Trajanoski Z
    Brief Bioinform; 2014 Mar; 15(2):256-78. PubMed ID: 23341494
    [TBL] [Abstract][Full Text] [Related]  

  • 9. New tools for Mendelian disease gene identification: PhenoDB variant analysis module; and GeneMatcher, a web-based tool for linking investigators with an interest in the same gene.
    Sobreira N; Schiettecatte F; Boehm C; Valle D; Hamosh A
    Hum Mutat; 2015 Apr; 36(4):425-31. PubMed ID: 25684268
    [TBL] [Abstract][Full Text] [Related]  

  • 10. wKGGSeq: A Comprehensive Strategy-Based and Disease-Targeted Online Framework to Facilitate Exome Sequencing Studies of Inherited Disorders.
    Li MJ; Deng J; Wang P; Yang W; Ho SL; Sham PC; Wang J; Li M
    Hum Mutat; 2015 May; 36(5):496-503. PubMed ID: 25676918
    [TBL] [Abstract][Full Text] [Related]  

  • 11. GeneMatcher: a matching tool for connecting investigators with an interest in the same gene.
    Sobreira N; Schiettecatte F; Valle D; Hamosh A
    Hum Mutat; 2015 Oct; 36(10):928-30. PubMed ID: 26220891
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Prioritizing disease-linked variants, genes, and pathways with an interactive whole-genome analysis pipeline.
    Lee IH; Lee K; Hsing M; Choe Y; Park JH; Kim SH; Bohn JM; Neu MB; Hwang KB; Green RC; Kohane IS; Kong SW
    Hum Mutat; 2014 May; 35(5):537-47. PubMed ID: 24478219
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Using CellMiner 1.6 for Systems Pharmacology and Genomic Analysis of the NCI-60.
    Reinhold WC; Sunshine M; Varma S; Doroshow JH; Pommier Y
    Clin Cancer Res; 2015 Sep; 21(17):3841-52. PubMed ID: 26048278
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A Broad Overview of Computational Methods for Predicting the Pathophysiological Effects of Non-synonymous Variants.
    Castellana S; Fusilli C; Mazza T
    Methods Mol Biol; 2016; 1415():423-40. PubMed ID: 27115646
    [TBL] [Abstract][Full Text] [Related]  

  • 15. VarElect: the phenotype-based variation prioritizer of the GeneCards Suite.
    Stelzer G; Plaschkes I; Oz-Levi D; Alkelai A; Olender T; Zimmerman S; Twik M; Belinky F; Fishilevich S; Nudel R; Guan-Golan Y; Warshawsky D; Dahary D; Kohn A; Mazor Y; Kaplan S; Iny Stein T; Baris HN; Rappaport N; Safran M; Lancet D
    BMC Genomics; 2016 Jun; 17 Suppl 2(Suppl 2):444. PubMed ID: 27357693
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Genome analysis and knowledge-driven variant interpretation with TGex.
    Dahary D; Golan Y; Mazor Y; Zelig O; Barshir R; Twik M; Iny Stein T; Rosner G; Kariv R; Chen F; Zhang Q; Shen Y; Safran M; Lancet D; Fishilevich S
    BMC Med Genomics; 2019 Dec; 12(1):200. PubMed ID: 31888639
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Medical implications of technical accuracy in genome sequencing.
    Goldfeder RL; Priest JR; Zook JM; Grove ME; Waggott D; Wheeler MT; Salit M; Ashley EA
    Genome Med; 2016 Mar; 8(1):24. PubMed ID: 26932475
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Global inference of disease-causing single nucleotide variants from exome sequencing data.
    Wu M; Chen T; Jiang R
    BMC Bioinformatics; 2016 Dec; 17(Suppl 17):468. PubMed ID: 28155632
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Semantic prioritization of novel causative genomic variants.
    Boudellioua I; Mahamad Razali RB; Kulmanov M; Hashish Y; Bajic VB; Goncalves-Serra E; Schoenmakers N; Gkoutos GV; Schofield PN; Hoehndorf R
    PLoS Comput Biol; 2017 Apr; 13(4):e1005500. PubMed ID: 28414800
    [TBL] [Abstract][Full Text] [Related]  

  • 20. An heuristic filtering tool to identify phenotype-associated genetic variants applied to human intellectual disability and canine coat colors.
    Broeckx BJ; Coopman F; Verhoeven G; Bosmans T; Gielen I; Dingemanse W; Saunders JH; Deforce D; Van Nieuwerburgh F
    BMC Bioinformatics; 2015 Nov; 16():391. PubMed ID: 26597515
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.