These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

299 related articles for article (PubMed ID: 27160013)

  • 1. Estimation of ribosome profiling performance and reproducibility at various levels of resolution.
    Diament A; Tuller T
    Biol Direct; 2016 May; 11():24. PubMed ID: 27160013
    [TBL] [Abstract][Full Text] [Related]  

  • 2. RiboGalaxy: A browser based platform for the alignment, analysis and visualization of ribosome profiling data.
    Michel AM; Mullan JP; Velayudhan V; O'Connor PB; Donohue CA; Baranov PV
    RNA Biol; 2016; 13(3):316-9. PubMed ID: 26821742
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Studying Selenoprotein mRNA Translation Using RNA-Seq and Ribosome Profiling.
    Dalley BK; Baird L; Howard MT
    Methods Mol Biol; 2018; 1661():103-123. PubMed ID: 28917040
    [TBL] [Abstract][Full Text] [Related]  

  • 4. HRPDviewer: human ribosome profiling data viewer.
    Wu WS; Jiang YX; Chang JW; Chu YH; Chiu YH; Tsao YH; Nordling TEM; Tseng YY; Tseng JT
    Database (Oxford); 2018 Jan; 2018():. PubMed ID: 30010738
    [TBL] [Abstract][Full Text] [Related]  

  • 5. RiboDiPA: a novel tool for differential pattern analysis in Ribo-seq data.
    Li K; Hope CM; Wang XA; Wang JP
    Nucleic Acids Res; 2020 Dec; 48(21):12016-12029. PubMed ID: 33211868
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Ribosomal profiling adds new coding sequences to the proteome.
    Mumtaz MA; Couso JP
    Biochem Soc Trans; 2015 Dec; 43(6):1271-6. PubMed ID: 26614672
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Exploring Ribosome Positioning on Translating Transcripts with Ribosome Profiling.
    Spealman P; Wang H; May G; Kingsford C; McManus CJ
    Methods Mol Biol; 2016; 1358():71-97. PubMed ID: 26463378
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Detecting actively translated open reading frames in ribosome profiling data.
    Calviello L; Mukherjee N; Wyler E; Zauber H; Hirsekorn A; Selbach M; Landthaler M; Obermayer B; Ohler U
    Nat Methods; 2016 Feb; 13(2):165-70. PubMed ID: 26657557
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Beyond Read-Counts: Ribo-seq Data Analysis to Understand the Functions of the Transcriptome.
    Calviello L; Ohler U
    Trends Genet; 2017 Oct; 33(10):728-744. PubMed ID: 28887026
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Ribosome Profiling in Maize.
    Chotewutmontri P; Stiffler N; Watkins KP; Barkan A
    Methods Mol Biol; 2018; 1676():165-183. PubMed ID: 28986910
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Multimapping confounds ribosome profiling analysis: A case-study of the Hsp90 molecular chaperone.
    Halpin JC; Jangi R; Street TO
    Proteins; 2020 Jan; 88(1):57-68. PubMed ID: 31254414
    [TBL] [Abstract][Full Text] [Related]  

  • 12. STATR: A simple analysis pipeline of Ribo-Seq in bacteria.
    Choe D; Palsson B; Cho BK
    J Microbiol; 2020 Mar; 58(3):217-226. PubMed ID: 31989542
    [TBL] [Abstract][Full Text] [Related]  

  • 13. RiboStreamR: a web application for quality control, analysis, and visualization of Ribo-seq data.
    Perkins P; Mazzoni-Putman S; Stepanova A; Alonso J; Heber S
    BMC Genomics; 2019 Jun; 20(Suppl 5):422. PubMed ID: 31167636
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Translation Analysis at the Genome Scale by Ribosome Profiling.
    Baudin-Baillieu A; Hatin I; Legendre R; Namy O
    Methods Mol Biol; 2016; 1361():105-24. PubMed ID: 26483019
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Recommendations for bacterial ribosome profiling experiments based on bioinformatic evaluation of published data.
    Glaub A; Huptas C; Neuhaus K; Ardern Z
    J Biol Chem; 2020 Jul; 295(27):8999-9011. PubMed ID: 32385111
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Poly-A Tailing and Adaptor Ligation Methods for Ribo-Seq Library Construction.
    Qiu J; Qian SB
    Methods Mol Biol; 2021; 2252():221-237. PubMed ID: 33765278
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The ribosome profiling landscape of yeast reveals a high diversity in pervasive translation.
    Papadopoulos C; Arbes H; Cornu D; Chevrollier N; Blanchet S; Roginski P; Rabier C; Atia S; Lespinet O; Namy O; Lopes A
    Genome Biol; 2024 Oct; 25(1):268. PubMed ID: 39402662
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Comparative survey of the relative impact of mRNA features on local ribosome profiling read density.
    O'Connor PB; Andreev DE; Baranov PV
    Nat Commun; 2016 Oct; 7():12915. PubMed ID: 27698342
    [TBL] [Abstract][Full Text] [Related]  

  • 19. RIBO-seq in Bacteria: a Sample Collection and Library Preparation Protocol for NGS Sequencing.
    Kopik N; Chrobak O; Latoch P; Kovalenko M; Starosta AL
    J Vis Exp; 2021 Aug; (174):. PubMed ID: 34424233
    [TBL] [Abstract][Full Text] [Related]  

  • 20. RiboReport - benchmarking tools for ribosome profiling-based identification of open reading frames in bacteria.
    Gelhausen R; Müller T; Svensson SL; Alkhnbashi OS; Sharma CM; Eggenhofer F; Backofen R
    Brief Bioinform; 2022 Mar; 23(2):. PubMed ID: 35037022
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.