714 related articles for article (PubMed ID: 27161996)
1. Dissecting the expression relationships between RNA-binding proteins and their cognate targets in eukaryotic post-transcriptional regulatory networks.
Nishtala S; Neelamraju Y; Janga SC
Sci Rep; 2016 May; 6():25711. PubMed ID: 27161996
[TBL] [Abstract][Full Text] [Related]
2. Human protein-RNA interaction network is highly stable across mammals.
Ramakrishnan A; Janga SC
BMC Genomics; 2019 Dec; 20(Suppl 12):1004. PubMed ID: 31888461
[TBL] [Abstract][Full Text] [Related]
3. PAR-CliP--a method to identify transcriptome-wide the binding sites of RNA binding proteins.
Hafner M; Landthaler M; Burger L; Khorshid M; Hausser J; Berninger P; Rothballer A; Ascano M; Jungkamp AC; Munschauer M; Ulrich A; Wardle GS; Dewell S; Zavolan M; Tuschl T
J Vis Exp; 2010 Jul; (41):. PubMed ID: 20644507
[TBL] [Abstract][Full Text] [Related]
4. Novel insights into global translational regulation through Pumilio family RNA-binding protein Puf3p revealed by ribosomal profiling.
Wang Z; Sun X; Wee J; Guo X; Gu Z
Curr Genet; 2019 Feb; 65(1):201-212. PubMed ID: 29951697
[TBL] [Abstract][Full Text] [Related]
5. CLIPdb: a CLIP-seq database for protein-RNA interactions.
Yang YC; Di C; Hu B; Zhou M; Liu Y; Song N; Li Y; Umetsu J; Lu ZJ
BMC Genomics; 2015 Feb; 16(1):51. PubMed ID: 25652745
[TBL] [Abstract][Full Text] [Related]
6. Dissecting the expression dynamics of RNA-binding proteins in posttranscriptional regulatory networks.
Mittal N; Roy N; Babu MM; Janga SC
Proc Natl Acad Sci U S A; 2009 Dec; 106(48):20300-5. PubMed ID: 19918083
[TBL] [Abstract][Full Text] [Related]
7. Posttranscriptional regulation of human endogenous retroviruses by RNA-binding motif protein 4, RBM4.
Foroushani AK; Chim B; Wong M; Rastegar A; Smith PT; Wang S; Barbian K; Martens C; Hafner M; Muljo SA
Proc Natl Acad Sci U S A; 2020 Oct; 117(42):26520-26530. PubMed ID: 33020268
[TBL] [Abstract][Full Text] [Related]
8. Seten: a tool for systematic identification and comparison of processes, phenotypes, and diseases associated with RNA-binding proteins from condition-specific CLIP-seq profiles.
Budak G; Srivastava R; Janga SC
RNA; 2017 Jun; 23(6):836-846. PubMed ID: 28336542
[TBL] [Abstract][Full Text] [Related]
9. In silico characterization and prediction of global protein-mRNA interactions in yeast.
Pancaldi V; Bähler J
Nucleic Acids Res; 2011 Aug; 39(14):5826-36. PubMed ID: 21459850
[TBL] [Abstract][Full Text] [Related]
10. Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system.
Hogan DJ; Riordan DP; Gerber AP; Herschlag D; Brown PO
PLoS Biol; 2008 Oct; 6(10):e255. PubMed ID: 18959479
[TBL] [Abstract][Full Text] [Related]
11. Mapping the Transcriptome-Wide Landscape of RBP Binding Sites Using gPAR-CLIP-seq: Experimental Procedures.
Han T; Kim JK
Methods Mol Biol; 2016; 1361():77-90. PubMed ID: 26483017
[TBL] [Abstract][Full Text] [Related]
12. Mapping the Transcriptome-Wide Landscape of RBP Binding Sites Using gPAR-CLIP-seq: Bioinformatic Analysis.
Freeberg MA; Kim JK
Methods Mol Biol; 2016; 1361():91-104. PubMed ID: 26483018
[TBL] [Abstract][Full Text] [Related]
13. Computational Analysis of RNA-Protein Interactions via Deep Sequencing.
Li L; Förstner KU; Chao Y
Methods Mol Biol; 2018; 1751():171-182. PubMed ID: 29508297
[TBL] [Abstract][Full Text] [Related]
14. Profiling post-transcriptionally networked mRNA subsets using RIP-Chip and RIP-Seq.
Jayaseelan S; Doyle F; Tenenbaum SA
Methods; 2014 May; 67(1):13-9. PubMed ID: 24257445
[TBL] [Abstract][Full Text] [Related]
15. Comprehensive and quantitative mapping of RNA-protein interactions across a transcribed eukaryotic genome.
She R; Chakravarty AK; Layton CJ; Chircus LM; Andreasson JO; Damaraju N; McMahon PL; Buenrostro JD; Jarosz DF; Greenleaf WJ
Proc Natl Acad Sci U S A; 2017 Apr; 114(14):3619-3624. PubMed ID: 28325876
[TBL] [Abstract][Full Text] [Related]
16. Genome-wide analysis of RNA-protein interactions in plants.
Barkan A
Methods Mol Biol; 2009; 553():13-37. PubMed ID: 19588099
[TBL] [Abstract][Full Text] [Related]
17. CLIP-Seq in Bacteria: Global Recognition Patterns of Bacterial RNA-Binding Proteins.
Andresen L; Holmqvist E
Methods Enzymol; 2018; 612():127-145. PubMed ID: 30502939
[TBL] [Abstract][Full Text] [Related]
18. rMAPS: RNA map analysis and plotting server for alternative exon regulation.
Park JW; Jung S; Rouchka EC; Tseng YT; Xing Y
Nucleic Acids Res; 2016 Jul; 44(W1):W333-8. PubMed ID: 27174931
[TBL] [Abstract][Full Text] [Related]
19. The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs.
Beckmann BM; Horos R; Fischer B; Castello A; Eichelbaum K; Alleaume AM; Schwarzl T; Curk T; Foehr S; Huber W; Krijgsveld J; Hentze MW
Nat Commun; 2015 Dec; 6():10127. PubMed ID: 26632259
[TBL] [Abstract][Full Text] [Related]
20. RNA-binding protein immunopurification-microarray (RIP-Chip) analysis to profile localized RNAs.
Galgano A; Gerber AP
Methods Mol Biol; 2011; 714():369-85. PubMed ID: 21431753
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
