BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

1437 related articles for article (PubMed ID: 27174935)

  • 1. tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes.
    Lowe TM; Chan PP
    Nucleic Acids Res; 2016 Jul; 44(W1):W54-7. PubMed ID: 27174935
    [TBL] [Abstract][Full Text] [Related]  

  • 2. GtRNAdb 2.0: an expanded database of transfer RNA genes identified in complete and draft genomes.
    Chan PP; Lowe TM
    Nucleic Acids Res; 2016 Jan; 44(D1):D184-9. PubMed ID: 26673694
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Improving tRNAscan-SE Annotation Results via Ensemble Classifiers.
    Zou Q; Guo J; Ju Y; Wu M; Zeng X; Hong Z
    Mol Inform; 2015 Nov; 34(11-12):761-70. PubMed ID: 27491037
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs.
    Schattner P; Brooks AN; Lowe TM
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W686-9. PubMed ID: 15980563
    [TBL] [Abstract][Full Text] [Related]  

  • 5. GtRNAdb: a database of transfer RNA genes detected in genomic sequence.
    Chan PP; Lowe TM
    Nucleic Acids Res; 2009 Jan; 37(Database issue):D93-7. PubMed ID: 18984615
    [TBL] [Abstract][Full Text] [Related]  

  • 6. tRNAscan-SE: Searching for tRNA Genes in Genomic Sequences.
    Chan PP; Lowe TM
    Methods Mol Biol; 2019; 1962():1-14. PubMed ID: 31020551
    [TBL] [Abstract][Full Text] [Related]  

  • 7. tRNAscan-SE 2.0: improved detection and functional classification of transfer RNA genes.
    Chan PP; Lin BY; Mak AJ; Lowe TM
    Nucleic Acids Res; 2021 Sep; 49(16):9077-9096. PubMed ID: 34417604
    [TBL] [Abstract][Full Text] [Related]  

  • 8. tRNA-DL: A Deep Learning Approach to Improve tRNAscan-SE Prediction Results.
    Gao X; Wei Z; Hakonarson H
    Hum Hered; 2018; 83(3):163-172. PubMed ID: 30685762
    [TBL] [Abstract][Full Text] [Related]  

  • 9. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.
    Lowe TM; Eddy SR
    Nucleic Acids Res; 1997 Mar; 25(5):955-64. PubMed ID: 9023104
    [TBL] [Abstract][Full Text] [Related]  

  • 10. On distinguishing between canonical tRNA genes and tRNA gene fragments in prokaryotes.
    van der Gulik PTS; Egas M; Kraaijeveld K; Dombrowski N; Groot AT; Spang A; Hoff WD; Gallie J
    RNA Biol; 2023 Jan; 20(1):48-58. PubMed ID: 36727270
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The UCSC Archaeal Genome Browser: 2012 update.
    Chan PP; Holmes AD; Smith AM; Tran D; Lowe TM
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D646-52. PubMed ID: 22080555
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A comprehensive collection of annotations to interpret sequence variation in human mitochondrial transfer RNAs.
    Diroma MA; Lubisco P; Attimonelli M
    BMC Bioinformatics; 2016 Nov; 17(Suppl 12):338. PubMed ID: 28185569
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Very fast identification of RNA motifs in genomic DNA. Application to tRNA search in the yeast genome.
    el-Mabrouk N; Lisacek F
    J Mol Biol; 1996 Nov; 264(1):46-55. PubMed ID: 8950266
    [TBL] [Abstract][Full Text] [Related]  

  • 14. SPLITS: a new program for predicting split and intron-containing tRNA genes at the genome level.
    Sugahara J; Yachie N; Sekine Y; Soma A; Matsui M; Tomita M; Kanai A
    In Silico Biol; 2006; 6(5):411-8. PubMed ID: 17274770
    [TBL] [Abstract][Full Text] [Related]  

  • 15. tRNADB-CE: tRNA gene database curated manually by experts.
    Abe T; Ikemura T; Ohara Y; Uehara H; Kinouchi M; Kanaya S; Yamada Y; Muto A; Inokuchi H
    Nucleic Acids Res; 2009 Jan; 37(Database issue):D163-8. PubMed ID: 18842632
    [TBL] [Abstract][Full Text] [Related]  

  • 16. DBtRend: A Web-Server of tRNA Expression Profiles from Small RNA Sequencing Data in Humans.
    Lee JO; Lee M; Chung YJ
    Genes (Basel); 2021 Oct; 12(10):. PubMed ID: 34680971
    [TBL] [Abstract][Full Text] [Related]  

  • 17. TFAM 1.0: an online tRNA function classifier.
    Tåquist H; Cui Y; Ardell DH
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W350-3. PubMed ID: 17591612
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Transfer RNA genes in the cap-oxil region of yeast mitochondrial DNA.
    Berlani RE; Bonitz SG; Coruzzi G; Nobrega M; Tzagoloff A
    Nucleic Acids Res; 1980 Nov; 8(21):5017-30. PubMed ID: 7003547
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Cryptic tRNAs in chaetognath mitochondrial genomes.
    Barthélémy RM; Seligmann H
    Comput Biol Chem; 2016 Jun; 62():119-32. PubMed ID: 27150240
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Prediction and verification of mouse tRNA gene families.
    Coughlin DJ; Babak T; Nihranz C; Hughes TR; Engelke DR
    RNA Biol; 2009; 6(2):195-202. PubMed ID: 19246989
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 72.