These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

155 related articles for article (PubMed ID: 27177143)

  • 21. A latent class model with hidden Markov dependence for array CGH data.
    DeSantis SM; Houseman EA; Coull BA; Louis DN; Mohapatra G; Betensky RA
    Biometrics; 2009 Dec; 65(4):1296-305. PubMed ID: 19397578
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Family-Based Benchmarking of Copy Number Variation Detection Software.
    Nutsua ME; Fischer A; Nebel A; Hofmann S; Schreiber S; Krawczak M; Nothnagel M
    PLoS One; 2015; 10(7):e0133465. PubMed ID: 26197066
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Modeling the DNA copy number aberration patterns in observational high-throughput cancer data.
    van Wieringen WN; Roś BP; Wilting SM
    Stat Appl Genet Mol Biol; 2013 Apr; 12(2):143-74. PubMed ID: 23735435
    [TBL] [Abstract][Full Text] [Related]  

  • 24. A BAYESIAN NONPARAMETRIC MODEL FOR RECONSTRUCTING TUMOR SUBCLONES BASED ON MUTATION PAIRS.
    Sengupta S; Zhou T; Müeller P; Ji Y
    Pac Symp Biocomput; 2016; 21():393-404. PubMed ID: 26776203
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Array comparative genomic hybridization (array CGH) for detection of genomic copy number variants.
    Ahn JW; Coldwell M; Bint S; Mackie Ogilvie C
    J Vis Exp; 2015 Feb; (96):e51718. PubMed ID: 25742425
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Target inference from collections of genomic intervals.
    Krasnitz A; Sun G; Andrews P; Wigler M
    Proc Natl Acad Sci U S A; 2013 Jun; 110(25):E2271-8. PubMed ID: 23744040
    [TBL] [Abstract][Full Text] [Related]  

  • 27. tmle.npvi: targeted, integrative search of associations between DNA copy number and gene expression, accounting for DNA methylation.
    Chambaz A; Neuvial P
    Bioinformatics; 2015 Sep; 31(18):3054-6. PubMed ID: 26002884
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Bayesian localization of CNV candidates in WGS data within minutes.
    Wiedenhoeft J; Cagan A; Kozhemyakina R; Gulevich R; Schliep A
    Algorithms Mol Biol; 2019; 14():20. PubMed ID: 31572486
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Parsimonious higher-order hidden Markov models for improved array-CGH analysis with applications to Arabidopsis thaliana.
    Seifert M; Gohr A; Strickert M; Grosse I
    PLoS Comput Biol; 2012 Jan; 8(1):e1002286. PubMed ID: 22253580
    [TBL] [Abstract][Full Text] [Related]  

  • 30. A statistical approach for array CGH data analysis.
    Picard F; Robin S; Lavielle M; Vaisse C; Daudin JJ
    BMC Bioinformatics; 2005 Feb; 6():27. PubMed ID: 15705208
    [TBL] [Abstract][Full Text] [Related]  

  • 31. CLImAT-HET: detecting subclonal copy number alterations and loss of heterozygosity in heterogeneous tumor samples from whole-genome sequencing data.
    Yu Z; Li A; Wang M
    BMC Med Genomics; 2017 Mar; 10(1):15. PubMed ID: 28298214
    [TBL] [Abstract][Full Text] [Related]  

  • 32. PHAISTOS: a framework for Markov chain Monte Carlo simulation and inference of protein structure.
    Boomsma W; Frellsen J; Harder T; Bottaro S; Johansson KE; Tian P; Stovgaard K; Andreetta C; Olsson S; Valentin JB; Antonov LD; Christensen AS; Borg M; Jensen JH; Lindorff-Larsen K; Ferkinghoff-Borg J; Hamelryck T
    J Comput Chem; 2013 Jul; 34(19):1697-705. PubMed ID: 23619610
    [TBL] [Abstract][Full Text] [Related]  

  • 33. A HIERARCHICAL BAYESIAN MODEL FOR INFERENCE OF COPY NUMBER VARIANTS AND THEIR ASSOCIATION TO GENE EXPRESSION.
    Cassese A; Guindani M; Tadesse MG; Falciani F; Vannucci M
    Ann Appl Stat; 2014 Mar; 8(1):148-175. PubMed ID: 24834139
    [TBL] [Abstract][Full Text] [Related]  

  • 34. GNU MCSim: Bayesian statistical inference for SBML-coded systems biology models.
    Bois FY
    Bioinformatics; 2009 Jun; 25(11):1453-4. PubMed ID: 19304877
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Post-selection inference for changepoint detection algorithms with application to copy number variation data.
    Hyun S; Lin KZ; G'Sell M; Tibshirani RJ
    Biometrics; 2021 Sep; 77(3):1037-1049. PubMed ID: 33434289
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Comparative genomic hybridization to detect variation in the copy number of large DNA segments.
    Holcomb IN; Trask BJ
    Cold Spring Harb Protoc; 2011 Nov; 2011(11):1323-33. PubMed ID: 22046040
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Hybrid algorithms for multiple change-point detection in biological sequences.
    Priyadarshana M; Polushina T; Sofronov G
    Adv Exp Med Biol; 2015; 823():41-61. PubMed ID: 25381101
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Characterization of copy number variation in genomic regions containing STR loci using array comparative genomic hybridization.
    Repnikova EA; Rosenfeld JA; Bailes A; Weber C; Erdman L; McKinney A; Ramsey S; Hashimoto S; Lamb Thrush D; Astbury C; Reshmi SC; Shaffer LG; Gastier-Foster JM; Pyatt RE
    Forensic Sci Int Genet; 2013 Sep; 7(5):475-81. PubMed ID: 23948316
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Reconstruction of pedigrees in clonal plant populations.
    Riester M; Stadler PF; Klemm K
    Theor Popul Biol; 2010 Sep; 78(2):109-17. PubMed ID: 20566407
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Integration of Multiple Genomic Data Sources in a Bayesian Cox Model for Variable Selection and Prediction.
    Treppmann T; Ickstadt K; Zucknick M
    Comput Math Methods Med; 2017; 2017():7340565. PubMed ID: 28828032
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.