316 related articles for article (PubMed ID: 27249516)
1. Unraveling the mechanisms of chromatin fibril packaging.
Gavrilov AA; Shevelyov YY; Ulianov SV; Khrameeva EE; Kos P; Chertovich A; Razin SV
Nucleus; 2016 May; 7(3):319-24. PubMed ID: 27249516
[TBL] [Abstract][Full Text] [Related]
2. Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains.
Ulianov SV; Khrameeva EE; Gavrilov AA; Flyamer IM; Kos P; Mikhaleva EA; Penin AA; Logacheva MD; Imakaev MV; Chertovich A; Gelfand MS; Shevelyov YY; Razin SV
Genome Res; 2016 Jan; 26(1):70-84. PubMed ID: 26518482
[TBL] [Abstract][Full Text] [Related]
3. Quantitative differences in TAD border strength underly the TAD hierarchy in Drosophila chromosomes.
Luzhin AV; Flyamer IM; Khrameeva EE; Ulianov SV; Razin SV; Gavrilov AA
J Cell Biochem; 2019 Mar; 120(3):4494-4503. PubMed ID: 30260021
[TBL] [Abstract][Full Text] [Related]
4. 3D genome evolution and reorganization in the Drosophila melanogaster species group.
Torosin NS; Anand A; Golla TR; Cao W; Ellison CE
PLoS Genet; 2020 Dec; 16(12):e1009229. PubMed ID: 33284803
[TBL] [Abstract][Full Text] [Related]
5. TADs are 3D structural units of higher-order chromosome organization in
Szabo Q; Jost D; Chang JM; Cattoni DI; Papadopoulos GL; Bonev B; Sexton T; Gurgo J; Jacquier C; Nollmann M; Bantignies F; Cavalli G
Sci Adv; 2018 Feb; 4(2):eaar8082. PubMed ID: 29503869
[TBL] [Abstract][Full Text] [Related]
6. Microscopy-Based Chromosome Conformation Capture Enables Simultaneous Visualization of Genome Organization and Transcription in Intact Organisms.
Cardozo Gizzi AM; Cattoni DI; Fiche JB; Espinola SM; Gurgo J; Messina O; Houbron C; Ogiyama Y; Papadopoulos GL; Cavalli G; Lagha M; Nollmann M
Mol Cell; 2019 Apr; 74(1):212-222.e5. PubMed ID: 30795893
[TBL] [Abstract][Full Text] [Related]
7. Topologically associating domains and their role in the evolution of genome structure and function in
Liao Y; Zhang X; Chakraborty M; Emerson JJ
Genome Res; 2021 Mar; 31(3):397-410. PubMed ID: 33563719
[TBL] [Abstract][Full Text] [Related]
8. Sub-kb Hi-C in D. melanogaster reveals conserved characteristics of TADs between insect and mammalian cells.
Wang Q; Sun Q; Czajkowsky DM; Shao Z
Nat Commun; 2018 Jan; 9(1):188. PubMed ID: 29335463
[TBL] [Abstract][Full Text] [Related]
9. Multi-Scale Organization of the
Peterson SC; Samuelson KB; Hanlon SL
Genes (Basel); 2021 May; 12(6):. PubMed ID: 34071789
[TBL] [Abstract][Full Text] [Related]
10. Distinct polymer physics principles govern chromatin dynamics in mouse and Drosophila topological domains.
Ea V; Sexton T; Gostan T; Herviou L; Baudement MO; Zhang Y; Berlivet S; Le Lay-Taha MN; Cathala G; Lesne A; Victor JM; Fan Y; Cavalli G; Forné T
BMC Genomics; 2015 Aug; 16(1):607. PubMed ID: 26271925
[TBL] [Abstract][Full Text] [Related]
11. Chromatin organization by an interplay of loop extrusion and compartmental segregation.
Nuebler J; Fudenberg G; Imakaev M; Abdennur N; Mirny LA
Proc Natl Acad Sci U S A; 2018 Jul; 115(29):E6697-E6706. PubMed ID: 29967174
[TBL] [Abstract][Full Text] [Related]
12. High-resolution TADs reveal DNA sequences underlying genome organization in flies.
Ramírez F; Bhardwaj V; Arrigoni L; Lam KC; Grüning BA; Villaveces J; Habermann B; Akhtar A; Manke T
Nat Commun; 2018 Jan; 9(1):189. PubMed ID: 29335486
[TBL] [Abstract][Full Text] [Related]
13. Nuclear lamina integrity is required for proper spatial organization of chromatin in Drosophila.
Ulianov SV; Doronin SA; Khrameeva EE; Kos PI; Luzhin AV; Starikov SS; Galitsyna AA; Nenasheva VV; Ilyin AA; Flyamer IM; Mikhaleva EA; Logacheva MD; Gelfand MS; Chertovich AV; Gavrilov AA; Razin SV; Shevelyov YY
Nat Commun; 2019 Mar; 10(1):1176. PubMed ID: 30862957
[TBL] [Abstract][Full Text] [Related]
14. TAD-like single-cell domain structures exist on both active and inactive X chromosomes and persist under epigenetic perturbations.
Cheng Y; Liu M; Hu M; Wang S
Genome Biol; 2021 Nov; 22(1):309. PubMed ID: 34749781
[TBL] [Abstract][Full Text] [Related]
15. Strong interactions between highly dynamic lamina-associated domains and the nuclear envelope stabilize the 3D architecture of Drosophila interphase chromatin.
Tolokh IS; Kinney NA; Sharakhov IV; Onufriev AV
Epigenetics Chromatin; 2023 May; 16(1):21. PubMed ID: 37254161
[TBL] [Abstract][Full Text] [Related]
16. Structural basis for the preservation of a subset of topologically associating domains in interphase chromosomes upon cohesin depletion.
Jeong D; Shi G; Li X; Thirumalai D
Elife; 2024 Mar; 12():. PubMed ID: 38502563
[TBL] [Abstract][Full Text] [Related]
17. Widespread rearrangement of 3D chromatin organization underlies polycomb-mediated stress-induced silencing.
Li L; Lyu X; Hou C; Takenaka N; Nguyen HQ; Ong CT; Cubeñas-Potts C; Hu M; Lei EP; Bosco G; Qin ZS; Corces VG
Mol Cell; 2015 Apr; 58(2):216-31. PubMed ID: 25818644
[TBL] [Abstract][Full Text] [Related]
18. Recent evidence that TADs and chromatin loops are dynamic structures.
Hansen AS; Cattoglio C; Darzacq X; Tjian R
Nucleus; 2018 Jan; 9(1):20-32. PubMed ID: 29077530
[TBL] [Abstract][Full Text] [Related]
19. In situ dissection of domain boundaries affect genome topology and gene transcription in Drosophila.
Arzate-Mejía RG; Josué Cerecedo-Castillo A; Guerrero G; Furlan-Magaril M; Recillas-Targa F
Nat Commun; 2020 Feb; 11(1):894. PubMed ID: 32060283
[TBL] [Abstract][Full Text] [Related]
20. HiTAD: detecting the structural and functional hierarchies of topologically associating domains from chromatin interactions.
Wang XT; Cui W; Peng C
Nucleic Acids Res; 2017 Nov; 45(19):e163. PubMed ID: 28977529
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
