BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

364 related articles for article (PubMed ID: 27270105)

  • 1. Haplotype estimation for biobank-scale data sets.
    O'Connell J; Sharp K; Shrine N; Wain L; Hall I; Tobin M; Zagury JF; Delaneau O; Marchini J
    Nat Genet; 2016 Jul; 48(7):817-20. PubMed ID: 27270105
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Fast and accurate long-range phasing in a UK Biobank cohort.
    Loh PR; Palamara PF; Price AL
    Nat Genet; 2016 Jul; 48(7):811-6. PubMed ID: 27270109
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Statistical phasing of 150,119 sequenced genomes in the UK Biobank.
    Browning BL; Browning SR
    Am J Hum Genet; 2023 Jan; 110(1):161-165. PubMed ID: 36450278
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Accurate rare variant phasing of whole-genome and whole-exome sequencing data in the UK Biobank.
    Hofmeister RJ; Ribeiro DM; Rubinacci S; Delaneau O
    Nat Genet; 2023 Jul; 55(7):1243-1249. PubMed ID: 37386248
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Accurate, scalable and integrative haplotype estimation.
    Delaneau O; Zagury JF; Robinson MR; Marchini JL; Dermitzakis ET
    Nat Commun; 2019 Nov; 10(1):5436. PubMed ID: 31780650
    [TBL] [Abstract][Full Text] [Related]  

  • 6. PWHATSHAP: efficient haplotyping for future generation sequencing.
    Bracciali A; Aldinucci M; Patterson M; Marschall T; Pisanti N; Merelli I; Torquati M
    BMC Bioinformatics; 2016 Sep; 17(Suppl 11):342. PubMed ID: 28185544
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The sequences of 150,119 genomes in the UK Biobank.
    Halldorsson BV; Eggertsson HP; Moore KHS; Hauswedell H; Eiriksson O; Ulfarsson MO; Palsson G; Hardarson MT; Oddsson A; Jensson BO; Kristmundsdottir S; Sigurpalsdottir BD; Stefansson OA; Beyter D; Holley G; Tragante V; Gylfason A; Olason PI; Zink F; Asgeirsdottir M; Sverrisson ST; Sigurdsson B; Gudjonsson SA; Sigurdsson GT; Halldorsson GH; Sveinbjornsson G; Norland K; Styrkarsdottir U; Magnusdottir DN; Snorradottir S; Kristinsson K; Sobech E; Jonsson H; Geirsson AJ; Olafsson I; Jonsson P; Pedersen OB; Erikstrup C; Brunak S; Ostrowski SR; ; Thorleifsson G; Jonsson F; Melsted P; Jonsdottir I; Rafnar T; Holm H; Stefansson H; Saemundsdottir J; Gudbjartsson DF; Magnusson OT; Masson G; Thorsteinsdottir U; Helgason A; Jonsson H; Sulem P; Stefansson K
    Nature; 2022 Jul; 607(7920):732-740. PubMed ID: 35859178
    [TBL] [Abstract][Full Text] [Related]  

  • 8. WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads.
    Patterson M; Marschall T; Pisanti N; van Iersel L; Stougie L; Klau GW; Schönhuth A
    J Comput Biol; 2015 Jun; 22(6):498-509. PubMed ID: 25658651
    [TBL] [Abstract][Full Text] [Related]  

  • 9. DCHap: A Divide-and-Conquer Haplotype Phasing Algorithm for Third-Generation Sequences.
    Li Y; Lin Y
    IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(3):1277-1284. PubMed ID: 32750878
    [TBL] [Abstract][Full Text] [Related]  

  • 10. WinHAP: an efficient haplotype phasing algorithm based on scalable sliding windows.
    Xu Y; Cheng W; Nie P; Zhou F
    PLoS One; 2012; 7(8):e43163. PubMed ID: 22905221
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Rapid genotype imputation from sequence without reference panels.
    Davies RW; Flint J; Myers S; Mott R
    Nat Genet; 2016 Aug; 48(8):965-969. PubMed ID: 27376236
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing.
    Selvaraj S; R Dixon J; Bansal V; Ren B
    Nat Biotechnol; 2013 Dec; 31(12):1111-8. PubMed ID: 24185094
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Thousands of missing variants in the UK Biobank are recoverable by genome realignment.
    Jia T; Munson B; Lango Allen H; Ideker T; Majithia AR
    Ann Hum Genet; 2020 May; 84(3):214-220. PubMed ID: 32232836
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Scalable probabilistic PCA for large-scale genetic variation data.
    Agrawal A; Chiu AM; Le M; Halperin E; Sankararaman S
    PLoS Genet; 2020 May; 16(5):e1008773. PubMed ID: 32469896
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A fast and scalable framework for large-scale and ultrahigh-dimensional sparse regression with application to the UK Biobank.
    Qian J; Tanigawa Y; Du W; Aguirre M; Chang C; Tibshirani R; Rivas MA; Hastie T
    PLoS Genet; 2020 Oct; 16(10):e1009141. PubMed ID: 33095761
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Odintifier--A computational method for identifying insertions of organellar origin from modern and ancient high-throughput sequencing data based on haplotype phasing.
    Samaniego Castruita JA; Zepeda Mendoza ML; Barnett R; Wales N; Gilbert MT
    BMC Bioinformatics; 2015 Jul; 16(1):232. PubMed ID: 26216337
    [TBL] [Abstract][Full Text] [Related]  

  • 17. HapCompass: a fast cycle basis algorithm for accurate haplotype assembly of sequence data.
    Aguiar D; Istrail S
    J Comput Biol; 2012 Jun; 19(6):577-90. PubMed ID: 22697235
    [TBL] [Abstract][Full Text] [Related]  

  • 18. RAFFI: Accurate and fast familial relationship inference in large scale biobank studies using RaPID.
    Naseri A; Shi J; Lin X; Zhang S; Zhi D
    PLoS Genet; 2021 Jan; 17(1):e1009315. PubMed ID: 33476339
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Rye: genetic ancestry inference at biobank scale.
    Conley AB; Rishishwar L; Ahmad M; Sharma S; Norris ET; Jordan IK; Mariño-Ramírez L
    Nucleic Acids Res; 2023 May; 51(8):e44. PubMed ID: 36928108
    [TBL] [Abstract][Full Text] [Related]  

  • 20. FNphasing: a novel fast heuristic algorithm for haplotype phasing based on flow network model.
    Yang J; Xu Y; Yao X; Chen G
    IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(2):372-82. PubMed ID: 23929861
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 19.