These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

215 related articles for article (PubMed ID: 27276943)

  • 1. Extracting water and ion distributions from solution x-ray scattering experiments.
    Nguyen HT; Pabit SA; Pollack L; Case DA
    J Chem Phys; 2016 Jun; 144(21):214105. PubMed ID: 27276943
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Accurate small and wide angle x-ray scattering profiles from atomic models of proteins and nucleic acids.
    Nguyen HT; Pabit SA; Meisburger SP; Pollack L; Case DA
    J Chem Phys; 2014 Dec; 141(22):22D508. PubMed ID: 25494779
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Determining the Locations of Ions and Water around DNA from X-Ray Scattering Measurements.
    Meisburger SP; Pabit SA; Pollack L
    Biophys J; 2015 Jun; 108(12):2886-95. PubMed ID: 26083928
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Integral equation models for solvent in macromolecular crystals.
    Gray JG; Giambaşu GM; Case DA; Luchko T
    J Chem Phys; 2022 Jan; 156(1):014801. PubMed ID: 34998331
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Calculation of small angle scattering intensities from molecular dynamics simulation.
    Marzel F; Smith JC
    Cell Mol Biol Lett; 2002; 7(1):134-5. PubMed ID: 11944067
    [TBL] [Abstract][Full Text] [Related]  

  • 6. RNA and its ionic cloud: solution scattering experiments and atomically detailed simulations.
    Kirmizialtin S; Pabit SA; Meisburger SP; Pollack L; Elber R
    Biophys J; 2012 Feb; 102(4):819-28. PubMed ID: 22385853
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Simulated x-ray scattering of protein solutions using explicit-solvent models.
    Park S; Bardhan JP; Roux B; Makowski L
    J Chem Phys; 2009 Apr; 130(13):134114. PubMed ID: 19355724
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Benchmarking predictive methods for small-angle X-ray scattering from atomic coordinates of proteins using maximum likelihood consensus data.
    Trewhella J; Vachette P; Larsen AH
    IUCrJ; 2024 Sep; 11(Pt 5):762-779. PubMed ID: 38989800
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Contribution of solvent water to the solution X-ray scattering profile of proteins.
    Seki Y; Tomizawa T; Khechinashvili NN; Soda K
    Biophys Chem; 2002 Mar; 95(3):235-52. PubMed ID: 12062383
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Calculation of local water densities in biological systems: a comparison of molecular dynamics simulations and the 3D-RISM-KH molecular theory of solvation.
    Stumpe MC; Blinov N; Wishart D; Kovalenko A; Pande VS
    J Phys Chem B; 2011 Jan; 115(2):319-28. PubMed ID: 21174421
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Model-potential-free analysis of small angle scattering of proteins in solution: insights into solvent effects on protein-protein interaction.
    Sumi T; Imamura H; Morita T; Isogai Y; Nishikawa K
    Phys Chem Chem Phys; 2014 Dec; 16(46):25492-7. PubMed ID: 25343423
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A first principle particle mesh method for solution SAXS of large bio-molecular systems.
    Marchi M
    J Chem Phys; 2016 Jul; 145(4):045101. PubMed ID: 27475396
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Stability and activity of lysozyme in stoichiometric and non-stoichiometric protic ionic liquid (PIL)-water systems.
    Wijaya EC; Separovic F; Drummond CJ; Greaves TL
    J Chem Phys; 2018 May; 148(19):193838. PubMed ID: 30307182
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Effects of ionic strength on SAXS data for proteins revealed by molecular dynamics simulations.
    Oroguchi T; Ikeguchi M
    J Chem Phys; 2011 Jan; 134(2):025102. PubMed ID: 21241150
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A highly parallelizable integral equation theory for three dimensional solvent distribution function: application to biomolecules.
    Yokogawa D; Sato H; Imai T; Sakaki S
    J Chem Phys; 2009 Feb; 130(6):064111. PubMed ID: 19222271
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Validating solution ensembles from molecular dynamics simulation by wide-angle X-ray scattering data.
    Chen PC; Hub JS
    Biophys J; 2014 Jul; 107(2):435-447. PubMed ID: 25028885
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Wide-angle X-ray scattering and molecular dynamics simulations of supercooled protein hydration water.
    Bin M; Yousif R; Berkowicz S; Das S; Schlesinger D; Perakis F
    Phys Chem Chem Phys; 2021 Sep; 23(34):18308-18313. PubMed ID: 34269785
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Versatile application of indirect Fourier transformation to structure factor analysis: from X-ray diffraction of molecular liquids to small angle scattering of protein solutions.
    Fukasawa T; Sato T
    Phys Chem Chem Phys; 2011 Feb; 13(8):3187-96. PubMed ID: 21229163
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Hydration structure of human lysozyme investigated by molecular dynamics simulation and cryogenic X-ray crystal structure analyses: on the correlation between crystal water sites, solvent density, and solvent dipole.
    Higo J; Nakasako M
    J Comput Chem; 2002 Nov; 23(14):1323-36. PubMed ID: 12214315
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Atomic-resolution structural information from scattering experiments on macromolecules in solution.
    Köfinger J; Hummer G
    Phys Rev E Stat Nonlin Soft Matter Phys; 2013 May; 87(5):052712. PubMed ID: 23767571
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.