580 related articles for article (PubMed ID: 27287878)
21. Constructing logical models of gene regulatory networks by integrating transcription factor-DNA interactions with expression data: an entropy-based approach.
Karlebach G; Shamir R
J Comput Biol; 2012 Jan; 19(1):30-41. PubMed ID: 22216865
[TBL] [Abstract][Full Text] [Related]
22. Next-Generation Genome-Scale Models Incorporating Multilevel 'Omics Data: From Yeast to Human.
Çakır T; Kökrek E; Avşar G; Abdik E; Pir P
Methods Mol Biol; 2019; 2049():347-363. PubMed ID: 31602621
[TBL] [Abstract][Full Text] [Related]
23. Reconstruction and analysis of the genetic and metabolic regulatory networks of the central metabolism of Bacillus subtilis.
Goelzer A; Bekkal Brikci F; Martin-Verstraete I; Noirot P; Bessières P; Aymerich S; Fromion V
BMC Syst Biol; 2008 Feb; 2():20. PubMed ID: 18302748
[TBL] [Abstract][Full Text] [Related]
24. Reconstruction of transcriptional network from microarray data using combined mutual information and network-assisted regression.
Wang XD; Qi YX; Jiang ZL
IET Syst Biol; 2011 Mar; 5(2):95-102. PubMed ID: 21405197
[TBL] [Abstract][Full Text] [Related]
25. Computational modeling in systems biology.
Vallabhajosyula RR; Raval A
Methods Mol Biol; 2010; 662():97-120. PubMed ID: 20824468
[TBL] [Abstract][Full Text] [Related]
26. Introduction: Cancer Gene Networks.
Clarke R
Methods Mol Biol; 2017; 1513():1-9. PubMed ID: 27807826
[TBL] [Abstract][Full Text] [Related]
27. Reconstruction of microbial transcriptional regulatory networks.
Herrgård MJ; Covert MW; Palsson BØ
Curr Opin Biotechnol; 2004 Feb; 15(1):70-7. PubMed ID: 15102470
[TBL] [Abstract][Full Text] [Related]
28. Where are we in genomics?
Hocquette JF
J Physiol Pharmacol; 2005 Jun; 56 Suppl 3():37-70. PubMed ID: 16077195
[TBL] [Abstract][Full Text] [Related]
29. Detecting structural invariants in biological reaction networks.
Behre J; de Figueiredo LF; Schuster S; Kaleta C
Methods Mol Biol; 2012; 804():377-407. PubMed ID: 22144164
[TBL] [Abstract][Full Text] [Related]
30. Integration of expression data in genome-scale metabolic network reconstructions.
Blazier AS; Papin JA
Front Physiol; 2012; 3():299. PubMed ID: 22934050
[TBL] [Abstract][Full Text] [Related]
31. Inferring regulatory networks.
Li H; Xuan J; Wang Y; Zhan M
Front Biosci; 2008 Jan; 13():263-75. PubMed ID: 17981545
[TBL] [Abstract][Full Text] [Related]
32. OM-FBA: Integrate Transcriptomics Data with Flux Balance Analysis to Decipher the Cell Metabolism.
Guo W; Feng X
PLoS One; 2016; 11(4):e0154188. PubMed ID: 27100883
[TBL] [Abstract][Full Text] [Related]
33. Exploring metabolic pathways in genome-scale networks via generating flux modes.
Rezola A; de Figueiredo LF; Brock M; Pey J; Podhorski A; Wittmann C; Schuster S; Bockmayr A; Planes FJ
Bioinformatics; 2011 Feb; 27(4):534-40. PubMed ID: 21149278
[TBL] [Abstract][Full Text] [Related]
34. Regulation of gene expression in flux balance models of metabolism.
Covert MW; Schilling CH; Palsson B
J Theor Biol; 2001 Nov; 213(1):73-88. PubMed ID: 11708855
[TBL] [Abstract][Full Text] [Related]
35. Inferring large-scale gene regulatory networks using a low-order constraint-based algorithm.
Wang M; Augusto Benedito V; Xuechun Zhao P; Udvardi M
Mol Biosyst; 2010 Jun; 6(6):988-98. PubMed ID: 20485743
[TBL] [Abstract][Full Text] [Related]
36. Advances in metabolic flux analysis toward genome-scale profiling of higher organisms.
Basler G; Fernie AR; Nikoloski Z
Biosci Rep; 2018 Dec; 38(6):. PubMed ID: 30341247
[TBL] [Abstract][Full Text] [Related]
37. Genome-Scale Brain Metabolic Networks as Scaffolds for the Systems Biology of Neurodegenerative Diseases: Mapping Metabolic Alterations.
Özcan E; Çakır T
Adv Neurobiol; 2018; 21():195-217. PubMed ID: 30334223
[TBL] [Abstract][Full Text] [Related]
38. Transcriptional Regulation in Archaea: From Individual Genes to Global Regulatory Networks.
Martinez-Pastor M; Tonner PD; Darnell CL; Schmid AK
Annu Rev Genet; 2017 Nov; 51():143-170. PubMed ID: 29178818
[TBL] [Abstract][Full Text] [Related]
39. Integrating -omics data into genome-scale metabolic network models: principles and challenges.
Ramon C; Gollub MG; Stelling J
Essays Biochem; 2018 Oct; 62(4):563-574. PubMed ID: 30315095
[TBL] [Abstract][Full Text] [Related]
40. redGEM: Systematic reduction and analysis of genome-scale metabolic reconstructions for development of consistent core metabolic models.
Ataman M; Hernandez Gardiol DF; Fengos G; Hatzimanikatis V
PLoS Comput Biol; 2017 Jul; 13(7):e1005444. PubMed ID: 28727725
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]