These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

254 related articles for article (PubMed ID: 27293312)

  • 21. One-Dimensional Structural Properties of Proteins in the Coarse-Grained CABS Model.
    Kmiecik S; Kolinski A
    Methods Mol Biol; 2017; 1484():83-113. PubMed ID: 27787822
    [TBL] [Abstract][Full Text] [Related]  

  • 22. AWSEM-Suite: a protein structure prediction server based on template-guided, coevolutionary-enhanced optimized folding landscapes.
    Jin S; Contessoto VG; Chen M; Schafer NP; Lu W; Chen X; Bueno C; Hajitaheri A; Sirovetz BJ; Davtyan A; Papoian GA; Tsai MY; Wolynes PG
    Nucleic Acids Res; 2020 Jul; 48(W1):W25-W30. PubMed ID: 32383764
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Folding funnels: the key to robust protein structure prediction.
    Hardin C; Eastwood MP; Prentiss M; Luthey-Schulten Z; Wolynes PG
    J Comput Chem; 2002 Jan; 23(1):138-46. PubMed ID: 11913379
    [TBL] [Abstract][Full Text] [Related]  

  • 24. The energy computation paradox and ab initio protein folding.
    Faver JC; Benson ML; He X; Roberts BP; Wang B; Marshall MS; Sherrill CD; Merz KM
    PLoS One; 2011 Apr; 6(4):e18868. PubMed ID: 21541343
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Structure and conformational dynamics of scaffolded DNA origami nanoparticles.
    Pan K; Bricker WP; Ratanalert S; Bathe M
    Nucleic Acids Res; 2017 Jun; 45(11):6284-6298. PubMed ID: 28482032
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Ab initio RNA folding.
    Cragnolini T; Derreumaux P; Pasquali S
    J Phys Condens Matter; 2015 Jun; 27(23):233102. PubMed ID: 25993396
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Modeling and predicting RNA three-dimensional structures.
    Waldispühl J; Reinharz V
    Methods Mol Biol; 2015; 1269():101-21. PubMed ID: 25577374
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Computational Modeling of DNA 3D Structures: From Dynamics and Mechanics to Folding.
    Mu ZC; Tan YL; Liu J; Zhang BG; Shi YZ
    Molecules; 2023 Jun; 28(12):. PubMed ID: 37375388
    [TBL] [Abstract][Full Text] [Related]  

  • 29. RNA 3D structure prediction by using a coarse-grained model and experimental data.
    Xia Z; Bell DR; Shi Y; Ren P
    J Phys Chem B; 2013 Mar; 117(11):3135-44. PubMed ID: 23438338
    [TBL] [Abstract][Full Text] [Related]  

  • 30. RNA 3D Structure Prediction Using Coarse-Grained Models.
    Li J; Chen SJ
    Front Mol Biosci; 2021; 8():720937. PubMed ID: 34277713
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Exploring the folding free energy landscape of a β-hairpin miniprotein, chignolin, using multiscale free energy landscape calculation method.
    Harada R; Kitao A
    J Phys Chem B; 2011 Jul; 115(27):8806-12. PubMed ID: 21648487
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Predicting RNA structure: advances and limitations.
    Hofacker IL; Lorenz R
    Methods Mol Biol; 2014; 1086():1-19. PubMed ID: 24136595
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Predicting optical spectra for optoelectronic polymers using coarse-grained models and recurrent neural networks.
    Simine L; Allen TC; Rossky PJ
    Proc Natl Acad Sci U S A; 2020 Jun; 117(25):13945-13948. PubMed ID: 32513725
    [TBL] [Abstract][Full Text] [Related]  

  • 34. The folding energy landscape and phosphorylation: modeling the conformational switch of the NFAT regulatory domain.
    Shen T; Zong C; Hamelberg D; McCammon JA; Wolynes PG
    FASEB J; 2005 Sep; 19(11):1389-95. PubMed ID: 16126906
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Evolution, energy landscapes and the paradoxes of protein folding.
    Wolynes PG
    Biochimie; 2015 Dec; 119():218-30. PubMed ID: 25530262
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Less Is More: Coarse-Grained Integrative Modeling of Large Biomolecular Assemblies with HADDOCK.
    Roel-Touris J; Don CG; V Honorato R; Rodrigues JPGLM; Bonvin AMJJ
    J Chem Theory Comput; 2019 Nov; 15(11):6358-6367. PubMed ID: 31539250
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Single-molecule dynamics reveals cooperative binding-folding in protein recognition.
    Wang J; Lu Q; Lu HP
    PLoS Comput Biol; 2006 Jul; 2(7):e78. PubMed ID: 16839193
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Basin Hopping Graph: a computational framework to characterize RNA folding landscapes.
    Kucharík M; Hofacker IL; Stadler PF; Qin J
    Bioinformatics; 2014 Jul; 30(14):2009-17. PubMed ID: 24648041
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Statistical modeling of RNA structure profiling experiments enables parsimonious reconstruction of structure landscapes.
    Li H; Aviran S
    Nat Commun; 2018 Feb; 9(1):606. PubMed ID: 29426922
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Prediction of protein structure by simulating coarse-grained folding pathways: a preliminary report.
    Colubri A
    J Biomol Struct Dyn; 2004 Apr; 21(5):625-38. PubMed ID: 14769055
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 13.