BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

204 related articles for article (PubMed ID: 27342544)

  • 1. Evaluation of the External RNA Controls Consortium (ERCC) reference material using a modified Latin square design.
    Pine PS; Munro SA; Parsons JR; McDaniel J; Lucas AB; Lozach J; Myers TG; Su Q; Jacobs-Helber SM; Salit M
    BMC Biotechnol; 2016 Jun; 16(1):54. PubMed ID: 27342544
    [TBL] [Abstract][Full Text] [Related]  

  • 2. mRNA enrichment protocols determine the quantification characteristics of external RNA spike-in controls in RNA-Seq studies.
    Qing T; Yu Y; Du T; Shi L
    Sci China Life Sci; 2013 Feb; 56(2):134-42. PubMed ID: 23393029
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Evaluation of external RNA controls for the standardisation of gene expression biomarker measurements.
    Devonshire AS; Elaswarapu R; Foy CA
    BMC Genomics; 2010 Nov; 11():662. PubMed ID: 21106083
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Cross-platform ultradeep transcriptomic profiling of human reference RNA samples by RNA-Seq.
    Xu J; Su Z; Hong H; Thierry-Mieg J; Thierry-Mieg D; Kreil DP; Mason CE; Tong W; Shi L
    Sci Data; 2014; 1():140020. PubMed ID: 25977777
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Evaluation of external RNA controls for the assessment of microarray performance.
    Tong W; Lucas AB; Shippy R; Fan X; Fang H; Hong H; Orr MS; Chu TM; Guo X; Collins PJ; Sun YA; Wang SJ; Bao W; Wolfinger RD; Shchegrova S; Guo L; Warrington JA; Shi L
    Nat Biotechnol; 2006 Sep; 24(9):1132-9. PubMed ID: 16964227
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Assessment of Single Cell RNA-Seq Normalization Methods.
    Ding B; Zheng L; Wang W
    G3 (Bethesda); 2017 Jul; 7(7):2039-2045. PubMed ID: 28468817
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays.
    Wang Y; Barbacioru C; Hyland F; Xiao W; Hunkapiller KL; Blake J; Chan F; Gonzalez C; Zhang L; Samaha RR
    BMC Genomics; 2006 Mar; 7():59. PubMed ID: 16551369
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Use of diagnostic accuracy as a metric for evaluating laboratory proficiency with microarray assays using mixed-tissue RNA reference samples.
    Pine PS; Boedigheimer M; Rosenzweig BA; Turpaz Y; He YD; Delenstarr G; Ganter B; Jarnagin K; Jones WD; Reid LH; Thompson KL
    Pharmacogenomics; 2008 Nov; 9(11):1753-63. PubMed ID: 19018728
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Using Synthetic Mouse Spike-In Transcripts to Evaluate RNA-Seq Analysis Tools.
    Leshkowitz D; Feldmesser E; Friedlander G; Jona G; Ainbinder E; Parmet Y; Horn-Saban S
    PLoS One; 2016; 11(4):e0153782. PubMed ID: 27100792
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Proposed methods for testing and selecting the ERCC external RNA controls.
    External RNA Controls Consortium
    BMC Genomics; 2005 Nov; 6():150. PubMed ID: 16266432
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology.
    Yu J; Cliften PF; Juehne TI; Sinnwell TM; Sawyer CS; Sharma M; Lutz A; Tycksen E; Johnson MR; Minton MR; Klotz ET; Schriefer AE; Yang W; Heinz ME; Crosby SD; Head RD
    BMC Genomics; 2015 Sep; 16(1):710. PubMed ID: 26385698
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Correlation between RNA-Seq and microarrays results using TCGA data.
    Chen L; Sun F; Yang X; Jin Y; Shi M; Wang L; Shi Y; Zhan C; Wang Q
    Gene; 2017 Sep; 628():200-204. PubMed ID: 28734892
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Synthetic spike-in standards for RNA-seq experiments.
    Jiang L; Schlesinger F; Davis CA; Zhang Y; Li R; Salit M; Gingeras TR; Oliver B
    Genome Res; 2011 Sep; 21(9):1543-51. PubMed ID: 21816910
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comprehensive evaluation of AmpliSeq transcriptome, a novel targeted whole transcriptome RNA sequencing methodology for global gene expression analysis.
    Li W; Turner A; Aggarwal P; Matter A; Storvick E; Arnett DK; Broeckel U
    BMC Genomics; 2015 Dec; 16():1069. PubMed ID: 26673413
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium.
    SEQC/MAQC-III Consortium
    Nat Biotechnol; 2014 Sep; 32(9):903-14. PubMed ID: 25150838
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Benchmarking of the Oxford Nanopore MinION sequencing for quantitative and qualitative assessment of cDNA populations.
    Oikonomopoulos S; Wang YC; Djambazian H; Badescu D; Ragoussis J
    Sci Rep; 2016 Aug; 6():31602. PubMed ID: 27554526
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A comparison of Illumina and Ion Torrent sequencing platforms in the context of differential gene expression.
    Lahens NF; Ricciotti E; Smirnova O; Toorens E; Kim EJ; Baruzzo G; Hayer KE; Ganguly T; Schug J; Grant GR
    BMC Genomics; 2017 Aug; 18(1):602. PubMed ID: 28797240
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Improving reliability and absolute quantification of human brain microarray data by filtering and scaling probes using RNA-Seq.
    Miller JA; Menon V; Goldy J; Kaykas A; Lee CK; Smith KA; Shen EH; Phillips JW; Lein ES; Hawrylycz MJ
    BMC Genomics; 2014 Feb; 15(1):154. PubMed ID: 24564186
    [TBL] [Abstract][Full Text] [Related]  

  • 19. 3' tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer.
    Asmann YW; Klee EW; Thompson EA; Perez EA; Middha S; Oberg AL; Therneau TM; Smith DI; Poland GA; Wieben ED; Kocher JP
    BMC Genomics; 2009 Nov; 10():531. PubMed ID: 19917133
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Targeted RNA-sequencing with competitive multiplex-PCR amplicon libraries.
    Blomquist TM; Crawford EL; Lovett JL; Yeo J; Stanoszek LM; Levin A; Li J; Lu M; Shi L; Muldrew K; Willey JC
    PLoS One; 2013; 8(11):e79120. PubMed ID: 24236095
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.