581 related articles for article (PubMed ID: 27485345)
1. INC-Seq: accurate single molecule reads using nanopore sequencing.
Li C; Chng KR; Boey EJ; Ng AH; Wilm A; Nagarajan N
Gigascience; 2016 Aug; 5(1):34. PubMed ID: 27485345
[TBL] [Abstract][Full Text] [Related]
2. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
[TBL] [Abstract][Full Text] [Related]
3. NanoAmpli-Seq: a workflow for amplicon sequencing for mixed microbial communities on the nanopore sequencing platform.
Calus ST; Ijaz UZ; Pinto AJ
Gigascience; 2018 Dec; 7(12):. PubMed ID: 30476081
[TBL] [Abstract][Full Text] [Related]
4. Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer.
Benítez-Páez A; Portune KJ; Sanz Y
Gigascience; 2016; 5():4. PubMed ID: 26823973
[TBL] [Abstract][Full Text] [Related]
5. Analysis of the mouse gut microbiome using full-length 16S rRNA amplicon sequencing.
Shin J; Lee S; Go MJ; Lee SY; Kim SC; Lee CH; Cho BK
Sci Rep; 2016 Jul; 6():29681. PubMed ID: 27411898
[TBL] [Abstract][Full Text] [Related]
6. Nanopore sequencing of long ribosomal DNA amplicons enables portable and simple biodiversity assessments with high phylogenetic resolution across broad taxonomic scale.
Krehenwinkel H; Pomerantz A; Henderson JB; Kennedy SR; Lim JY; Swamy V; Shoobridge JD; Graham N; Patel NH; Gillespie RG; Prost S
Gigascience; 2019 May; 8(5):. PubMed ID: 30824940
[TBL] [Abstract][Full Text] [Related]
7. Optimized bacterial community characterization through full-length 16S rRNA gene sequencing utilizing MinION nanopore technology.
Bertolo A; Valido E; Stoyanov J
BMC Microbiol; 2024 Feb; 24(1):58. PubMed ID: 38365589
[TBL] [Abstract][Full Text] [Related]
8. EnsembleSeq: a workflow towards real-time, rapid, and simultaneous multi-kingdom-amplicon sequencing for holistic and resource-effective microbiome research at scale.
Nagpal S; Mande SS; Hooda H; Dutta U; Taneja B
Microbiol Spectr; 2024 Jun; 12(6):e0415023. PubMed ID: 38687072
[TBL] [Abstract][Full Text] [Related]
9. Species-level bacterial community profiling of the healthy sinonasal microbiome using Pacific Biosciences sequencing of full-length 16S rRNA genes.
Earl JP; Adappa ND; Krol J; Bhat AS; Balashov S; Ehrlich RL; Palmer JN; Workman AD; Blasetti M; Sen B; Hammond J; Cohen NA; Ehrlich GD; Mell JC
Microbiome; 2018 Oct; 6(1):190. PubMed ID: 30352611
[TBL] [Abstract][Full Text] [Related]
10. A portable system for rapid bacterial composition analysis using a nanopore-based sequencer and laptop computer.
Mitsuhashi S; Kryukov K; Nakagawa S; Takeuchi JS; Shiraishi Y; Asano K; Imanishi T
Sci Rep; 2017 Jul; 7(1):5657. PubMed ID: 28720805
[TBL] [Abstract][Full Text] [Related]
11. Comparative evaluation of analytical pipelines for illumina short- and nanopore long-read 16S rRNA gene amplicon sequencing with mock microbial communities.
Ota Y; Yasunaga K; Mahazu S; Prah I; Nagai S; Hayashi T; Suzuki M; Yoshida M; Hoshino Y; Akeda Y; Suzuki T; Gu Y; Saito R
J Microbiol Methods; 2024 Jun; 221():106929. PubMed ID: 38599390
[TBL] [Abstract][Full Text] [Related]
12. Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution.
Matsuo Y; Komiya S; Yasumizu Y; Yasuoka Y; Mizushima K; Takagi T; Kryukov K; Fukuda A; Morimoto Y; Naito Y; Okada H; Bono H; Nakagawa S; Hirota K
BMC Microbiol; 2021 Jan; 21(1):35. PubMed ID: 33499799
[TBL] [Abstract][Full Text] [Related]
13. Characterization of Fecal Microbiota with Clinical Specimen Using Long-Read and Short-Read Sequencing Platform.
Wei PL; Hung CS; Kao YW; Lin YC; Lee CY; Chang TH; Shia BC; Lin JC
Int J Mol Sci; 2020 Sep; 21(19):. PubMed ID: 32993155
[TBL] [Abstract][Full Text] [Related]
14. The newest Oxford Nanopore R10.4.1 full-length 16S rRNA sequencing enables the accurate resolution of species-level microbial community profiling.
Zhang T; Li H; Ma S; Cao J; Liao H; Huang Q; Chen W
Appl Environ Microbiol; 2023 Oct; 89(10):e0060523. PubMed ID: 37800969
[TBL] [Abstract][Full Text] [Related]
15. Comparison of Illumina versus Nanopore 16S rRNA Gene Sequencing of the Human Nasal Microbiota.
Heikema AP; Horst-Kreft D; Boers SA; Jansen R; Hiltemann SD; de Koning W; Kraaij R; de Ridder MAJ; van Houten CB; Bont LJ; Stubbs AP; Hays JP
Genes (Basel); 2020 Sep; 11(9):. PubMed ID: 32967250
[TBL] [Abstract][Full Text] [Related]
16. A multi-amplicon 16S rRNA sequencing and analysis method for improved taxonomic profiling of bacterial communities.
Schriefer AE; Cliften PF; Hibberd MC; Sawyer C; Brown-Kennerly V; Burcea L; Klotz E; Crosby SD; Gordon JI; Head RD
J Microbiol Methods; 2018 Nov; 154():6-13. PubMed ID: 30273610
[TBL] [Abstract][Full Text] [Related]
17. Profiling bacterial communities by MinION sequencing of ribosomal operons.
Kerkhof LJ; Dillon KP; Häggblom MM; McGuinness LR
Microbiome; 2017 Sep; 5(1):116. PubMed ID: 28911333
[TBL] [Abstract][Full Text] [Related]
18. Emu: species-level microbial community profiling of full-length 16S rRNA Oxford Nanopore sequencing data.
Curry KD; Wang Q; Nute MG; Tyshaieva A; Reeves E; Soriano S; Wu Q; Graeber E; Finzer P; Mendling W; Savidge T; Villapol S; Dilthey A; Treangen TJ
Nat Methods; 2022 Jul; 19(7):845-853. PubMed ID: 35773532
[TBL] [Abstract][Full Text] [Related]
19. Rapid diagnosis of bacterial meningitis by nanopore 16S amplicon sequencing: A pilot study.
Moon J; Kim N; Kim TJ; Jun JS; Lee HS; Shin HR; Lee ST; Jung KH; Park KI; Jung KY; Kim M; Lee SK; Chu K
Int J Med Microbiol; 2019 Sep; 309(6):151338. PubMed ID: 31444101
[TBL] [Abstract][Full Text] [Related]
20. TARGETING THE 16S RRNA GENE FOR BACTERIAL IDENTIFICATION IN COMPLEX MIXED SAMPLES: COMPARATIVE EVALUATION OF SECOND (ILLUMINA) AND THIRD (OXFORD NANOPORE TECHNOLOGIES) GENERATION SEQUENCING TECHNOLOGIES.
Winand R; Bogaerts B; Hoffman S; Lefevre L; Delvoye M; Braekel JV; Fu Q; Roosens NH; Keersmaecker SC; Vanneste K
Int J Mol Sci; 2019 Dec; 21(1):. PubMed ID: 31906254
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
