101 related articles for article (PubMed ID: 27488386)
1. A comparison of different functions for predicted protein model quality assessment.
Li J; Fang H
J Comput Aided Mol Des; 2016 Jul; 30(7):553-8. PubMed ID: 27488386
[TBL] [Abstract][Full Text] [Related]
2. QMEAN: A comprehensive scoring function for model quality assessment.
Benkert P; Tosatto SC; Schomburg D
Proteins; 2008 Apr; 71(1):261-77. PubMed ID: 17932912
[TBL] [Abstract][Full Text] [Related]
3. FragQA: predicting local fragment quality of a sequence-structure alignment.
Gao X; Bu D; Li SC; Xu J; Li M
Genome Inform; 2007; 19():27-39. PubMed ID: 18546502
[TBL] [Abstract][Full Text] [Related]
4. Computational modeling of protein mutant stability: analysis and optimization of statistical potentials and structural features reveal insights into prediction model development.
Parthiban V; Gromiha MM; Abhinandan M; Schomburg D
BMC Struct Biol; 2007 Aug; 7():54. PubMed ID: 17705837
[TBL] [Abstract][Full Text] [Related]
5. Global and local model quality estimation at CASP8 using the scoring functions QMEAN and QMEANclust.
Benkert P; Tosatto SC; Schwede T
Proteins; 2009; 77 Suppl 9():173-80. PubMed ID: 19705484
[TBL] [Abstract][Full Text] [Related]
6. Ab initio protein structure prediction using chunk-TASSER.
Zhou H; Skolnick J
Biophys J; 2007 Sep; 93(5):1510-8. PubMed ID: 17496016
[TBL] [Abstract][Full Text] [Related]
7. Structural profile matrices for predicting structural properties of proteins.
Azginoglu N; Aydin Z; Celik M
J Bioinform Comput Biol; 2020 Aug; 18(4):2050022. PubMed ID: 32649260
[TBL] [Abstract][Full Text] [Related]
8. QMEANclust: estimation of protein model quality by combining a composite scoring function with structural density information.
Benkert P; Schwede T; Tosatto SC
BMC Struct Biol; 2009 May; 9():35. PubMed ID: 19457232
[TBL] [Abstract][Full Text] [Related]
9. Solvent and lipid accessibility prediction as a basis for model quality assessment in soluble and membrane proteins.
Phatak M; Adamczak R; Cao B; Wagner M; Meller J
Curr Protein Pept Sci; 2011 Sep; 12(6):563-73. PubMed ID: 21787302
[TBL] [Abstract][Full Text] [Related]
10. Evaluating the absolute quality of a single protein model using structural features and support vector machines.
Wang Z; Tegge AN; Cheng J
Proteins; 2009 May; 75(3):638-47. PubMed ID: 19004001
[TBL] [Abstract][Full Text] [Related]
11. Estimating quality of template-based protein models by alignment stability.
Chen H; Kihara D
Proteins; 2008 May; 71(3):1255-74. PubMed ID: 18041762
[TBL] [Abstract][Full Text] [Related]
12. Relationship between multiple sequence alignments and quality of protein comparative models.
Cozzetto D; Tramontano A
Proteins; 2005 Jan; 58(1):151-7. PubMed ID: 15495137
[TBL] [Abstract][Full Text] [Related]
13. Prediction of beta-turns at over 80% accuracy based on an ensemble of predicted secondary structures and multiple alignments.
Zheng C; Kurgan L
BMC Bioinformatics; 2008 Oct; 9():430. PubMed ID: 18847492
[TBL] [Abstract][Full Text] [Related]
14. ANGLOR: a composite machine-learning algorithm for protein backbone torsion angle prediction.
Wu S; Zhang Y
PLoS One; 2008; 3(10):e3400. PubMed ID: 18923703
[TBL] [Abstract][Full Text] [Related]
15. Progress in protein structure prediction: assessment of CASP3.
Sternberg MJ; Bates PA; Kelley LA; MacCallum RM
Curr Opin Struct Biol; 1999 Jun; 9(3):368-73. PubMed ID: 10361096
[TBL] [Abstract][Full Text] [Related]
16. StackSSSPred: A Stacking-Based Prediction of Supersecondary Structure from Sequence.
Flot M; Mishra A; Kuchi AS; Hoque MT
Methods Mol Biol; 2019; 1958():101-122. PubMed ID: 30945215
[TBL] [Abstract][Full Text] [Related]
17. Combining evolutionary and structural information for local protein structure prediction.
Pei J; Grishin NV
Proteins; 2004 Sep; 56(4):782-94. PubMed ID: 15281130
[TBL] [Abstract][Full Text] [Related]
18. Bayesian models and algorithms for protein β-sheet prediction.
Aydin Z; Altunbasak Y; Erdogan H
IEEE/ACM Trans Comput Biol Bioinform; 2011; 8(2):395-409. PubMed ID: 21233522
[TBL] [Abstract][Full Text] [Related]
19. The use of automatic tools and human expertise in template-based modeling of CASP8 target proteins.
Venclovas C; Margelevicius M
Proteins; 2009; 77 Suppl 9():81-8. PubMed ID: 19639635
[TBL] [Abstract][Full Text] [Related]
20. High accuracy template based modeling by global optimization.
Joo K; Lee J; Lee S; Seo JH; Lee SJ; Lee J
Proteins; 2007; 69 Suppl 8():83-9. PubMed ID: 17894332
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]