212 related articles for article (PubMed ID: 27496222)
1. Disrupted cooperation between transcription factors across diverse cancer types.
Wang J; Liu Q; Sun J; Shyr Y
BMC Genomics; 2016 Aug; 17():560. PubMed ID: 27496222
[TBL] [Abstract][Full Text] [Related]
2. A comprehensive survey for human transcription factors on expression, regulation, interaction, phenotype and cancer survival.
Hu H; Zhang Q; Hu FF; Liu CJ; Guo AY
Brief Bioinform; 2021 Sep; 22(5):. PubMed ID: 33517372
[TBL] [Abstract][Full Text] [Related]
3. Properly defining the targets of a transcription factor significantly improves the computational identification of cooperative transcription factor pairs in yeast.
Wu WS; Lai FJ
BMC Genomics; 2015; 16 Suppl 12(Suppl 12):S10. PubMed ID: 26679776
[TBL] [Abstract][Full Text] [Related]
4. Interplay among Drosophila transcription factors Ets21c, Fos and Ftz-F1 drives JNK-mediated tumor malignancy.
Külshammer E; Mundorf J; Kilinc M; Frommolt P; Wagle P; Uhlirova M
Dis Model Mech; 2015 Oct; 8(10):1279-93. PubMed ID: 26398940
[TBL] [Abstract][Full Text] [Related]
5. A novel framework for inferring condition-specific TF and miRNA co-regulation of protein-protein interactions.
Zhang J; Le TD; Liu L; He J; Li J
Gene; 2016 Feb; 577(1):55-64. PubMed ID: 26611531
[TBL] [Abstract][Full Text] [Related]
6. Identifying cooperativity among transcription factors controlling the cell cycle in yeast.
Banerjee N; Zhang MQ
Nucleic Acids Res; 2003 Dec; 31(23):7024-31. PubMed ID: 14627835
[TBL] [Abstract][Full Text] [Related]
7. Identifying cooperative transcription factors in yeast using multiple data sources.
Lai FJ; Jhu MH; Chiu CC; Huang YM; Wu WS
BMC Syst Biol; 2014; 8 Suppl 5(Suppl 5):S2. PubMed ID: 25559499
[TBL] [Abstract][Full Text] [Related]
8. The pan-cancer pathological regulatory landscape.
Falco MM; Bleda M; Carbonell-Caballero J; Dopazo J
Sci Rep; 2016 Dec; 6():39709. PubMed ID: 28000771
[TBL] [Abstract][Full Text] [Related]
9. Exploration of prognosis-related microRNA and transcription factor co-regulatory networks across cancer types.
Li R; Jiang S; Li W; Hong H; Zhao C; Huang X; Zhang Z; Li H; Chen H; Bo X
RNA Biol; 2019 Aug; 16(8):1010-1021. PubMed ID: 31046554
[TBL] [Abstract][Full Text] [Related]
10. Landscape of transcriptional deregulation in lung cancer.
Zhang S; Li M; Ji H; Fang Z
BMC Genomics; 2018 Jun; 19(1):435. PubMed ID: 29866045
[TBL] [Abstract][Full Text] [Related]
11. TF-centered downstream gene set enrichment analysis: Inference of causal regulators by integrating TF-DNA interactions and protein post-translational modifications information.
Liu Q; Tan Y; Huang T; Ding G; Tu Z; Liu L; Li Y; Dai H; Xie L
BMC Bioinformatics; 2010 Dec; 11 Suppl 11(Suppl 11):S5. PubMed ID: 21172055
[TBL] [Abstract][Full Text] [Related]
12. Inferring coregulation of transcription factors and microRNAs in breast cancer.
Wu JH; Sun YJ; Hsieh PH; Shieh GS
Gene; 2013 Apr; 518(1):139-44. PubMed ID: 23246694
[TBL] [Abstract][Full Text] [Related]
13. Dysregulation of Transcription Factor Activity During Formation of Cancer-Associated Fibroblasts.
Kapusta P; Dulińska-Litewka J; Totoń-Żurańska J; Borys A; Konieczny PS; Wołkow PP; Seweryn MT
Int J Mol Sci; 2020 Nov; 21(22):. PubMed ID: 33228208
[TBL] [Abstract][Full Text] [Related]
14. Inference of transcriptional regulation in cancers.
Jiang P; Freedman ML; Liu JS; Liu XS
Proc Natl Acad Sci U S A; 2015 Jun; 112(25):7731-6. PubMed ID: 26056275
[TBL] [Abstract][Full Text] [Related]
15. Integrated analysis of transcription factors and targets co-expression profiles reveals reduced correlation between transcription factors and target genes in cancer.
Liang J; Cui Y; Meng Y; Li X; Wang X; Liu W; Huang L; Du H
Funct Integr Genomics; 2019 Jan; 19(1):191-204. PubMed ID: 30251028
[TBL] [Abstract][Full Text] [Related]
16. Complex impact of DNA methylation on transcriptional dysregulation across 22 human cancer types.
Wang Z; Yin J; Zhou W; Bai J; Xie Y; Xu K; Zheng X; Xiao J; Zhou L; Qi X; Li Y; Li X; Xu J
Nucleic Acids Res; 2020 Mar; 48(5):2287-2302. PubMed ID: 32002550
[TBL] [Abstract][Full Text] [Related]
17. DiNeR: a Differential graphical model for analysis of co-regulation Network Rewiring.
Zhang J; Liu J; Lee D; Lou S; Chen Z; Gürsoy G; Gerstein M
BMC Bioinformatics; 2020 Jul; 21(1):281. PubMed ID: 32615918
[TBL] [Abstract][Full Text] [Related]
18. Circuits of cancer drivers revealed by convergent misregulation of transcription factor targets across tumor types.
Gonzalez-Perez A
Genome Med; 2016 Jan; 8(1):6. PubMed ID: 26792175
[TBL] [Abstract][Full Text] [Related]
19. Identification of transcription factor cooperativity via stochastic system model.
Chang YH; Wang YC; Chen BS
Bioinformatics; 2006 Sep; 22(18):2276-82. PubMed ID: 16844711
[TBL] [Abstract][Full Text] [Related]
20. TF-Marker: a comprehensive manually curated database for transcription factors and related markers in specific cell and tissue types in human.
Xu M; Bai X; Ai B; Zhang G; Song C; Zhao J; Wang Y; Wei L; Qian F; Li Y; Zhou X; Zhou L; Yang Y; Chen J; Liu J; Shang D; Wang X; Zhao Y; Huang X; Zheng Y; Zhang J; Wang Q; Li C
Nucleic Acids Res; 2022 Jan; 50(D1):D402-D412. PubMed ID: 34986601
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]