384 related articles for article (PubMed ID: 27497439)
1. genipe: an automated genome-wide imputation pipeline with automatic reporting and statistical tools.
Lemieux Perreault LP; Legault MA; Asselin G; Dubé MP
Bioinformatics; 2016 Dec; 32(23):3661-3663. PubMed ID: 27497439
[TBL] [Abstract][Full Text] [Related]
2. Gimpute: an efficient genetic data imputation pipeline.
Chen J; Lippold D; Frank J; Rayner W; Meyer-Lindenberg A; Schwarz E
Bioinformatics; 2019 Apr; 35(8):1433-1435. PubMed ID: 30239591
[TBL] [Abstract][Full Text] [Related]
3. Molgenis-impute: imputation pipeline in a box.
Kanterakis A; Deelen P; van Dijk F; Byelas H; Dijkstra M; Swertz MA
BMC Res Notes; 2015 Aug; 8():359. PubMed ID: 26286716
[TBL] [Abstract][Full Text] [Related]
4. Goldilocks: a tool for identifying genomic regions that are 'just right'.
Nicholls SM; Clare A; Randall JC
Bioinformatics; 2016 Jul; 32(13):2047-9. PubMed ID: 27153673
[TBL] [Abstract][Full Text] [Related]
5. synbreed: a framework for the analysis of genomic prediction data using R.
Wimmer V; Albrecht T; Auinger HJ; Schön CC
Bioinformatics; 2012 Aug; 28(15):2086-7. PubMed ID: 22689388
[TBL] [Abstract][Full Text] [Related]
6. DISTMIX: direct imputation of summary statistics for unmeasured SNPs from mixed ethnicity cohorts.
Lee D; Bigdeli TB; Williamson VS; Vladimirov VI; Riley BP; Fanous AH; Bacanu SA
Bioinformatics; 2015 Oct; 31(19):3099-104. PubMed ID: 26059716
[TBL] [Abstract][Full Text] [Related]
7. ssbio: a Python framework for structural systems biology.
Mih N; Brunk E; Chen K; Catoiu E; Sastry A; Kavvas E; Monk JM; Zhang Z; Palsson BO
Bioinformatics; 2018 Jun; 34(12):2155-2157. PubMed ID: 29444205
[TBL] [Abstract][Full Text] [Related]
8. greenPipes: an integrated data analysis pipeline for greenCUT&RUN and CUT&RUN genome-localization datasets.
Nizamuddin S; Timmers HTM
Bioinformatics; 2024 May; 40(5):. PubMed ID: 38718209
[TBL] [Abstract][Full Text] [Related]
9. BatchQC: interactive software for evaluating sample and batch effects in genomic data.
Manimaran S; Selby HM; Okrah K; Ruberman C; Leek JT; Quackenbush J; Haibe-Kains B; Bravo HC; Johnson WE
Bioinformatics; 2016 Dec; 32(24):3836-3838. PubMed ID: 27540268
[TBL] [Abstract][Full Text] [Related]
10. Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank.
Prlic A; Kalro T; Bhattacharya R; Christie C; Burley SK; Rose PW
Bioinformatics; 2016 Dec; 32(24):3833-3835. PubMed ID: 27551105
[TBL] [Abstract][Full Text] [Related]
11. Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data.
Bai Y; Kinne J; Donham B; Jiang F; Ding L; Hassler JR; Kaufman RJ
BMC Genomics; 2016 Aug; 17 Suppl 7(Suppl 7):503. PubMed ID: 27556805
[TBL] [Abstract][Full Text] [Related]
12. RICOPILI: Rapid Imputation for COnsortias PIpeLIne.
Lam M; Awasthi S; Watson HJ; Goldstein J; Panagiotaropoulou G; Trubetskoy V; Karlsson R; Frei O; Fan CC; De Witte W; Mota NR; Mullins N; Brügger K; Lee SH; Wray NR; Skarabis N; Huang H; Neale B; Daly MJ; Mattheisen M; Walters R; Ripke S
Bioinformatics; 2020 Feb; 36(3):930-933. PubMed ID: 31393554
[TBL] [Abstract][Full Text] [Related]
13. gwasurvivr: an R package for genome-wide survival analysis.
Rizvi AA; Karaesmen E; Morgan M; Preus L; Wang J; Sovic M; Hahn T; Sucheston-Campbell LE
Bioinformatics; 2019 Jun; 35(11):1968-1970. PubMed ID: 30395168
[TBL] [Abstract][Full Text] [Related]
14. GHap: an R package for genome-wide haplotyping.
Utsunomiya YT; Milanesi M; Utsunomiya AT; Ajmone-Marsan P; Garcia JF
Bioinformatics; 2016 Sep; 32(18):2861-2. PubMed ID: 27283951
[TBL] [Abstract][Full Text] [Related]
15. Highly Accurate and Efficient Data-Driven Methods for Genotype Imputation.
Choudhury O; Chakrabarty A; Emrich SJ
IEEE/ACM Trans Comput Biol Bioinform; 2019; 16(4):1107-1116. PubMed ID: 28574365
[TBL] [Abstract][Full Text] [Related]
16. EagleImp: fast and accurate genome-wide phasing and imputation in a single tool.
Wienbrandt L; Ellinghaus D
Bioinformatics; 2022 Nov; 38(22):4999-5006. PubMed ID: 36130053
[TBL] [Abstract][Full Text] [Related]
17. DoriTool: A Bioinformatics Integrative Tool for Post-Association Functional Annotation.
Martín-Antoniano I; Alonso L; Madrid M; López de Maturana E; Malats N
Public Health Genomics; 2017; 20(2):126-135. PubMed ID: 28700989
[TBL] [Abstract][Full Text] [Related]
18. MOLGENIS research: advanced bioinformatics data software for non-bioinformaticians.
van der Velde KJ; Imhann F; Charbon B; Pang C; van Enckevort D; Slofstra M; Barbieri R; Alberts R; Hendriksen D; Kelpin F; de Haan M; de Boer T; Haakma S; Stroomberg C; Scholtens S; van de Geijn GJ; Festen EAM; Weersma RK; Swertz MA
Bioinformatics; 2019 Mar; 35(6):1076-1078. PubMed ID: 30165396
[TBL] [Abstract][Full Text] [Related]
19. pyseer: a comprehensive tool for microbial pangenome-wide association studies.
Lees JA; Galardini M; Bentley SD; Weiser JN; Corander J
Bioinformatics; 2018 Dec; 34(24):4310-4312. PubMed ID: 30535304
[TBL] [Abstract][Full Text] [Related]
20. Odyssey: a semi-automated pipeline for phasing, imputation, and analysis of genome-wide genetic data.
Eller RJ; Janga SC; Walsh S
BMC Bioinformatics; 2019 Jun; 20(1):364. PubMed ID: 31253090
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]