BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

181 related articles for article (PubMed ID: 27512124)

  • 1. 3'READS+, a sensitive and accurate method for 3' end sequencing of polyadenylated RNA.
    Zheng D; Liu X; Tian B
    RNA; 2016 Oct; 22(10):1631-9. PubMed ID: 27512124
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Polyadenylation Site-Based Analysis of Transcript Expression by 3'READS.
    Zheng D; Tian B
    Methods Mol Biol; 2017; 1648():65-77. PubMed ID: 28766290
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Analysis of alternative cleavage and polyadenylation by 3' region extraction and deep sequencing.
    Hoque M; Ji Z; Zheng D; Luo W; Li W; You B; Park JY; Yehia G; Tian B
    Nat Methods; 2013 Feb; 10(2):133-9. PubMed ID: 23241633
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Accurate mapping of cleavage and polyadenylation sites by 3' region extraction and deep sequencing.
    Hoque M; Li W; Tian B
    Methods Mol Biol; 2014; 1125():119-29. PubMed ID: 24590784
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Implications of polyadenylation in health and disease.
    Curinha A; Oliveira Braz S; Pereira-Castro I; Cruz A; Moreira A
    Nucleus; 2014; 5(6):508-19. PubMed ID: 25484187
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in
    Liu X; Freitas J; Zheng D; Oliveira MS; Hoque M; Martins T; Henriques T; Tian B; Moreira A
    RNA; 2017 Dec; 23(12):1807-1816. PubMed ID: 28851752
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Poly(A)-ClickSeq: click-chemistry for next-generation 3΄-end sequencing without RNA enrichment or fragmentation.
    Routh A; Ji P; Jaworski E; Xia Z; Li W; Wagner EJ
    Nucleic Acids Res; 2017 Jul; 45(12):e112. PubMed ID: 28449108
    [TBL] [Abstract][Full Text] [Related]  

  • 8. 3'READS + RIP defines differential Staufen1 binding to alternative 3'UTR isoforms and reveals structures and sequence motifs influencing binding and polysome association.
    Zheng D; Cho H; Wang W; Rambout X; Tian B; Maquat LE
    RNA; 2020 Nov; 26(11):1621-1636. PubMed ID: 32796083
    [TBL] [Abstract][Full Text] [Related]  

  • 9. PolyA_DB 3 catalogs cleavage and polyadenylation sites identified by deep sequencing in multiple genomes.
    Wang R; Nambiar R; Zheng D; Tian B
    Nucleic Acids Res; 2018 Jan; 46(D1):D315-D319. PubMed ID: 29069441
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Mapping 3' mRNA isoforms on a genomic scale.
    Jin Y; Geisberg JV; Moqtaderi Z; Ji Z; Hoque M; Tian B; Struhl K
    Curr Protoc Mol Biol; 2015 Apr; 110():4.23.1-4.23.17. PubMed ID: 25827089
    [TBL] [Abstract][Full Text] [Related]  

  • 11. DPAC: A Tool for Differential Poly(A)-Cluster Usage from Poly(A)-Targeted RNAseq Data.
    Routh A
    G3 (Bethesda); 2019 Jun; 9(6):1825-1830. PubMed ID: 31023725
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq.
    Shepard PJ; Choi EA; Lu J; Flanagan LA; Hertel KJ; Shi Y
    RNA; 2011 Apr; 17(4):761-72. PubMed ID: 21343387
    [TBL] [Abstract][Full Text] [Related]  

  • 13. PAS-seq 2: A fast and sensitive method for global profiling of polyadenylated RNAs.
    Yoon Y; Soles LV; Shi Y
    Methods Enzymol; 2021; 655():25-35. PubMed ID: 34183125
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Alternative polyadenylation dysregulation contributes to the differentiation block of acute myeloid leukemia.
    Davis AG; Johnson DT; Zheng D; Wang R; Jayne ND; Liu M; Shin J; Wang L; Stoner SA; Zhou JH; Ball ED; Tian B; Zhang DE
    Blood; 2022 Jan; 139(3):424-438. PubMed ID: 34482400
    [TBL] [Abstract][Full Text] [Related]  

  • 15. DNA/RNA hybrid primer mediated poly(A) tag library construction for Illumina sequencing.
    Liu M; Wu X; Li QQ
    Methods Mol Biol; 2015; 1255():175-84. PubMed ID: 25487213
    [TBL] [Abstract][Full Text] [Related]  

  • 16. PAT-seq: a method to study the integration of 3'-UTR dynamics with gene expression in the eukaryotic transcriptome.
    Harrison PF; Powell DR; Clancy JL; Preiss T; Boag PR; Traven A; Seemann T; Beilharz TH
    RNA; 2015 Aug; 21(8):1502-10. PubMed ID: 26092945
    [TBL] [Abstract][Full Text] [Related]  

  • 17. REPAC: analysis of alternative polyadenylation from RNA-sequencing data.
    Imada EL; Wilks C; Langmead B; Marchionni L
    Genome Biol; 2023 Feb; 24(1):22. PubMed ID: 36759904
    [TBL] [Abstract][Full Text] [Related]  

  • 18. RNA sequencing and quantitation using the Helicos Genetic Analysis System.
    Raz T; Causey M; Jones DR; Kieu A; Letovsky S; Lipson D; Thayer E; Thompson JF; Milos PM
    Methods Mol Biol; 2011; 733():37-49. PubMed ID: 21431761
    [TBL] [Abstract][Full Text] [Related]  

  • 19. TRENDseq-A highly multiplexed high throughput RNA 3' end sequencing for mapping alternative polyadenylation.
    Ogorodnikov A; Danckwardt S
    Methods Enzymol; 2021; 655():37-72. PubMed ID: 34183130
    [TBL] [Abstract][Full Text] [Related]  

  • 20. mountainClimber Identifies Alternative Transcription Start and Polyadenylation Sites in RNA-Seq.
    Cass AA; Xiao X
    Cell Syst; 2019 Oct; 9(4):393-400.e6. PubMed ID: 31542416
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.