These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

287 related articles for article (PubMed ID: 27515514)

  • 1. COMAN: a web server for comprehensive metatranscriptomics analysis.
    Ni Y; Li J; Panagiotou G
    BMC Genomics; 2016 Aug; 17(1):622. PubMed ID: 27515514
    [TBL] [Abstract][Full Text] [Related]  

  • 2. MG-RAST, a Metagenomics Service for Analysis of Microbial Community Structure and Function.
    Keegan KP; Glass EM; Meyer F
    Methods Mol Biol; 2016; 1399():207-33. PubMed ID: 26791506
    [TBL] [Abstract][Full Text] [Related]  

  • 3. MicrobiomeAnalyst: a web-based tool for comprehensive statistical, visual and meta-analysis of microbiome data.
    Dhariwal A; Chong J; Habib S; King IL; Agellon LB; Xia J
    Nucleic Acids Res; 2017 Jul; 45(W1):W180-W188. PubMed ID: 28449106
    [TBL] [Abstract][Full Text] [Related]  

  • 4. MetaTrans: an open-source pipeline for metatranscriptomics.
    Martinez X; Pozuelo M; Pascal V; Campos D; Gut I; Gut M; Azpiroz F; Guarner F; Manichanh C
    Sci Rep; 2016 May; 6():26447. PubMed ID: 27211518
    [TBL] [Abstract][Full Text] [Related]  

  • 5. FMAP: Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies.
    Kim J; Kim MS; Koh AY; Xie Y; Zhan X
    BMC Bioinformatics; 2016 Oct; 17(1):420. PubMed ID: 27724866
    [TBL] [Abstract][Full Text] [Related]  

  • 6. WHAM!: a web-based visualization suite for user-defined analysis of metagenomic shotgun sequencing data.
    Devlin JC; Battaglia T; Blaser MJ; Ruggles KV
    BMC Genomics; 2018 Jun; 19(1):493. PubMed ID: 29940835
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Transcriptator: An Automated Computational Pipeline to Annotate Assembled Reads and Identify Non Coding RNA.
    Tripathi KP; Evangelista D; Zuccaro A; Guarracino MR
    PLoS One; 2015; 10(11):e0140268. PubMed ID: 26581084
    [TBL] [Abstract][Full Text] [Related]  

  • 8. SAMSA2: a standalone metatranscriptome analysis pipeline.
    Westreich ST; Treiber ML; Mills DA; Korf I; Lemay DG
    BMC Bioinformatics; 2018 May; 19(1):175. PubMed ID: 29783945
    [TBL] [Abstract][Full Text] [Related]  

  • 9. iSeq: Web-Based RNA-seq Data Analysis and Visualization.
    Zhang C; Fan C; Gan J; Zhu P; Kong L; Li C
    Methods Mol Biol; 2018; 1754():167-181. PubMed ID: 29536443
    [TBL] [Abstract][Full Text] [Related]  

  • 10. WebMGA: a customizable web server for fast metagenomic sequence analysis.
    Wu S; Zhu Z; Fu L; Niu B; Li W
    BMC Genomics; 2011 Sep; 12():444. PubMed ID: 21899761
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Metatranscriptomics: A Tool for Clinical Metagenomics.
    Tyagi S; Katara P
    OMICS; 2024 Aug; 28(8):394-407. PubMed ID: 39029911
    [TBL] [Abstract][Full Text] [Related]  

  • 12. MIPE: A metagenome-based community structure explorer and SSU primer evaluation tool.
    Zou B; Li J; Zhou Q; Quan ZX
    PLoS One; 2017; 12(3):e0174609. PubMed ID: 28350876
    [TBL] [Abstract][Full Text] [Related]  

  • 13. SPARTA: Simple Program for Automated reference-based bacterial RNA-seq Transcriptome Analysis.
    Johnson BK; Scholz MB; Teal TK; Abramovitch RB
    BMC Bioinformatics; 2016 Feb; 17():66. PubMed ID: 26847232
    [TBL] [Abstract][Full Text] [Related]  

  • 14. CPSS: a computational platform for the analysis of small RNA deep sequencing data.
    Zhang Y; Xu B; Yang Y; Ban R; Zhang H; Jiang X; Cooke HJ; Xue Y; Shi Q
    Bioinformatics; 2012 Jul; 28(14):1925-7. PubMed ID: 22576177
    [TBL] [Abstract][Full Text] [Related]  

  • 15. MOSCA 2.0: A bioinformatics framework for metagenomics, metatranscriptomics and metaproteomics data analysis and visualization.
    Sequeira JC; Pereira V; Alves MM; Pereira MA; Rocha M; Salvador AF
    Mol Ecol Resour; 2024 Oct; 24(7):e13996. PubMed ID: 39099161
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Methodologies for probing the metatranscriptome of grassland soil.
    Garoutte A; Cardenas E; Tiedje J; Howe A
    J Microbiol Methods; 2016 Dec; 131():122-129. PubMed ID: 27793585
    [TBL] [Abstract][Full Text] [Related]  

  • 17. IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses.
    Narayanasamy S; Jarosz Y; Muller EE; Heintz-Buschart A; Herold M; Kaysen A; Laczny CC; Pinel N; May P; Wilmes P
    Genome Biol; 2016 Dec; 17(1):260. PubMed ID: 27986083
    [TBL] [Abstract][Full Text] [Related]  

  • 18. MetCap: a bioinformatics probe design pipeline for large-scale targeted metagenomics.
    Kushwaha SK; Manoharan L; Meerupati T; Hedlund K; Ahrén D
    BMC Bioinformatics; 2015 Feb; 16(1):65. PubMed ID: 25880302
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Web Resources for Metagenomics Studies.
    Dudhagara P; Bhavsar S; Bhagat C; Ghelani A; Bhatt S; Patel R
    Genomics Proteomics Bioinformatics; 2015 Oct; 13(5):296-303. PubMed ID: 26602607
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Identification of natural antimicrobial peptides from bacteria through metagenomic and metatranscriptomic analysis of high-throughput transcriptome data of Taiwanese oolong teas.
    Huang KY; Chang TH; Jhong JH; Chi YH; Li WC; Chan CL; Robert Lai K; Lee TY
    BMC Syst Biol; 2017 Dec; 11(Suppl 7):131. PubMed ID: 29322917
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.