These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

248 related articles for article (PubMed ID: 27552057)

  • 1. Mapping transiently formed and sparsely populated conformations on a complex energy landscape.
    Wang Y; Papaleo E; Lindorff-Larsen K
    Elife; 2016 Aug; 5():. PubMed ID: 27552057
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Structure-relaxation mechanism for the response of T4 lysozyme cavity mutants to hydrostatic pressure.
    Lerch MT; López CJ; Yang Z; Kreitman MJ; Horwitz J; Hubbell WL
    Proc Natl Acad Sci U S A; 2015 May; 112(19):E2437-46. PubMed ID: 25918400
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Capturing Invisible Motions in the Transition from Ground to Rare Excited States of T4 Lysozyme L99A.
    Schiffer JM; Feher VA; Malmstrom RD; Sida R; Amaro RE
    Biophys J; 2016 Oct; 111(8):1631-1640. PubMed ID: 27760351
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Enhanced Sampling of Protein Conformational Transitions via Dynamically Optimized Collective Variables.
    Brotzakis ZF; Parrinello M
    J Chem Theory Comput; 2019 Feb; 15(2):1393-1398. PubMed ID: 30557019
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Slow internal dynamics in proteins: application of NMR relaxation dispersion spectroscopy to methyl groups in a cavity mutant of T4 lysozyme.
    Mulder FA; Hon B; Mittermaier A; Dahlquist FW; Kay LE
    J Am Chem Soc; 2002 Feb; 124(7):1443-51. PubMed ID: 11841314
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Cavity as a source of conformational fluctuation and high-energy state: high-pressure NMR study of a cavity-enlarged mutant of T4 lysozyme.
    Maeno A; Sindhikara D; Hirata F; Otten R; Dahlquist FW; Yokoyama S; Akasaka K; Mulder FA; Kitahara R
    Biophys J; 2015 Jan; 108(1):133-45. PubMed ID: 25564860
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Studying excited states of proteins by NMR spectroscopy.
    Mulder FA; Mittermaier A; Hon B; Dahlquist FW; Kay LE
    Nat Struct Biol; 2001 Nov; 8(11):932-5. PubMed ID: 11685237
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Escape of a Small Molecule from Inside T4 Lysozyme by Multiple Pathways.
    Nunes-Alves A; Zuckerman DM; Arantes GM
    Biophys J; 2018 Mar; 114(5):1058-1066. PubMed ID: 29539393
    [TBL] [Abstract][Full Text] [Related]  

  • 9. De Novo Prediction of Binders and Nonbinders for T4 Lysozyme by gREST Simulations.
    Niitsu A; Re S; Oshima H; Kamiya M; Sugita Y
    J Chem Inf Model; 2019 Sep; 59(9):3879-3888. PubMed ID: 31390205
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Solution structure of a minor and transiently formed state of a T4 lysozyme mutant.
    Bouvignies G; Vallurupalli P; Hansen DF; Correia BE; Lange O; Bah A; Vernon RM; Dahlquist FW; Baker D; Kay LE
    Nature; 2011 Aug; 477(7362):111-4. PubMed ID: 21857680
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Modeling protein-small molecule interactions: structure and thermodynamics of noble gases binding in a cavity in mutant phage T4 lysozyme L99A.
    Mann G; Hermans J
    J Mol Biol; 2000 Sep; 302(4):979-89. PubMed ID: 10993736
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Flexibility and ligand exchange in a buried cavity mutant of T4 lysozyme studied by multinuclear NMR.
    Mulder FA; Hon B; Muhandiram DR; Dahlquist FW; Kay LE
    Biochemistry; 2000 Oct; 39(41):12614-22. PubMed ID: 11027141
    [TBL] [Abstract][Full Text] [Related]  

  • 13. The energetics of T4 lysozyme reveal a hierarchy of conformations.
    Llinás M; Gillespie B; Dahlquist FW; Marqusee S
    Nat Struct Biol; 1999 Nov; 6(11):1072-8. PubMed ID: 10542101
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Protein-ligand binding free energies from exhaustive docking.
    Purisima EO; Hogues H
    J Phys Chem B; 2012 Jun; 116(23):6872-9. PubMed ID: 22432509
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Measurement of slow (micros-ms) time scale dynamics in protein side chains by (15)N relaxation dispersion NMR spectroscopy: application to Asn and Gln residues in a cavity mutant of T4 lysozyme.
    Mulder FA; Skrynnikov NR; Hon B; Dahlquist FW; Kay LE
    J Am Chem Soc; 2001 Feb; 123(5):967-75. PubMed ID: 11456632
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Testing a flexible-receptor docking algorithm in a model binding site.
    Wei BQ; Weaver LH; Ferrari AM; Matthews BW; Shoichet BK
    J Mol Biol; 2004 Apr; 337(5):1161-82. PubMed ID: 15046985
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Revealing Multiple Pathways in T4 Lysozyme Substep Conformational Motions by Single-Molecule Enzymology and Modeling.
    Lu M; Lu HP
    J Phys Chem B; 2017 May; 121(19):5017-5024. PubMed ID: 28425708
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Fluctuation Flooding Method (FFM) for accelerating conformational transitions of proteins.
    Harada R; Takano Y; Shigeta Y
    J Chem Phys; 2014 Mar; 140(12):125103. PubMed ID: 24697482
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Mechanisms for Benzene Dissociation through the Excited State of T4 Lysozyme L99A Mutant.
    Feher VA; Schiffer JM; Mermelstein DJ; Mih N; Pierce LCT; McCammon JA; Amaro RE
    Biophys J; 2019 Jan; 116(2):205-214. PubMed ID: 30606449
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Conformational selection and adaptation to ligand binding in T4 lysozyme cavity mutants.
    López CJ; Yang Z; Altenbach C; Hubbell WL
    Proc Natl Acad Sci U S A; 2013 Nov; 110(46):E4306-15. PubMed ID: 24167295
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.