243 related articles for article (PubMed ID: 27572735)
1. Databases and Archiving for CryoEM.
Patwardhan A; Lawson CL
Methods Enzymol; 2016; 579():393-412. PubMed ID: 27572735
[TBL] [Abstract][Full Text] [Related]
2. EMDataBank.org: unified data resource for CryoEM.
Lawson CL; Baker ML; Best C; Bi C; Dougherty M; Feng P; van Ginkel G; Devkota B; Lagerstedt I; Ludtke SJ; Newman RH; Oldfield TJ; Rees I; Sahni G; Sala R; Velankar S; Warren J; Westbrook JD; Henrick K; Kleywegt GJ; Berman HM; Chiu W
Nucleic Acids Res; 2011 Jan; 39(Database issue):D456-64. PubMed ID: 20935055
[TBL] [Abstract][Full Text] [Related]
3. Web-based visualisation and analysis of 3D electron-microscopy data from EMDB and PDB.
Lagerstedt I; Moore WJ; Patwardhan A; Sanz-García E; Best C; Swedlow JR; Kleywegt GJ
J Struct Biol; 2013 Nov; 184(2):173-81. PubMed ID: 24113529
[TBL] [Abstract][Full Text] [Related]
4. Unified data resource for cryo-EM.
Lawson CL
Methods Enzymol; 2010; 483():73-90. PubMed ID: 20888470
[TBL] [Abstract][Full Text] [Related]
5. EMPIAR: the Electron Microscopy Public Image Archive.
Iudin A; Korir PK; Somasundharam S; Weyand S; Cattavitello C; Fonseca N; Salih O; Kleywegt GJ; Patwardhan A
Nucleic Acids Res; 2023 Jan; 51(D1):D1503-D1511. PubMed ID: 36440762
[TBL] [Abstract][Full Text] [Related]
6. Electron microscopy holdings of the Protein Data Bank: the impact of the resolution revolution, new validation tools, and implications for the future.
Burley SK; Berman HM; Chiu W; Dai W; Flatt JW; Hudson BP; Kaelber JT; Khare SD; Kulczyk AW; Lawson CL; Pintilie GD; Sali A; Vallat B; Westbrook JD; Young JY; Zardecki C
Biophys Rev; 2022 Dec; 14(6):1281-1301. PubMed ID: 36474933
[TBL] [Abstract][Full Text] [Related]
7. Evolution of standardization and dissemination of cryo-EM structures and data jointly by the community, PDB, and EMDB.
Chiu W; Schmid MF; Pintilie GD; Lawson CL
J Biol Chem; 2021; 296():100560. PubMed ID: 33744287
[TBL] [Abstract][Full Text] [Related]
8. Workshop on the validation and modeling of electron cryo-microscopy structures of biological nanomachines.
Ludtke SJ; Lawson CL; Kleywegt GJ; Berman HM; Chiu W
Pac Symp Biocomput; 2011; ():369-73. PubMed ID: 21121065
[TBL] [Abstract][Full Text] [Related]
9. Protein Data Bank (PDB): The Single Global Macromolecular Structure Archive.
Burley SK; Berman HM; Kleywegt GJ; Markley JL; Nakamura H; Velankar S
Methods Mol Biol; 2017; 1607():627-641. PubMed ID: 28573592
[TBL] [Abstract][Full Text] [Related]
10. Common conventions for interchange and archiving of three-dimensional electron microscopy information in structural biology.
Heymann JB; Chagoyen M; Belnap DM
J Struct Biol; 2005 Aug; 151(2):196-207. PubMed ID: 16043364
[TBL] [Abstract][Full Text] [Related]
11. Trends in the Electron Microscopy Data Bank (EMDB).
Patwardhan A
Acta Crystallogr D Struct Biol; 2017 Jun; 73(Pt 6):503-508. PubMed ID: 28580912
[TBL] [Abstract][Full Text] [Related]
12. EMDataBank unified data resource for 3DEM.
Lawson CL; Patwardhan A; Baker ML; Hryc C; Garcia ES; Hudson BP; Lagerstedt I; Ludtke SJ; Pintilie G; Sala R; Westbrook JD; Berman HM; Kleywegt GJ; Chiu W
Nucleic Acids Res; 2016 Jan; 44(D1):D396-403. PubMed ID: 26578576
[TBL] [Abstract][Full Text] [Related]
13. The Electron Microscopy eXchange (EMX) initiative.
Marabini R; Ludtke SJ; Murray SC; Chiu W; de la Rosa-Trevín JM; Patwardhan A; Heymann JB; Carazo JM
J Struct Biol; 2016 May; 194(2):156-63. PubMed ID: 26873784
[TBL] [Abstract][Full Text] [Related]
14. Validation analysis of EMDB entries.
Wang Z; Patwardhan A; Kleywegt GJ
Acta Crystallogr D Struct Biol; 2022 May; 78(Pt 5):542-552. PubMed ID: 35503203
[TBL] [Abstract][Full Text] [Related]
15. EMDB Web Resources.
Abbott S; Iudin A; Korir PK; Somasundharam S; Patwardhan A
Curr Protoc Bioinformatics; 2018 Mar; 61(1):5.10.1-5.10.12. PubMed ID: 30008982
[TBL] [Abstract][Full Text] [Related]
16. The role of structural bioinformatics resources in the era of integrative structural biology.
Gutmanas A; Oldfield TJ; Patwardhan A; Sen S; Velankar S; Kleywegt GJ
Acta Crystallogr D Biol Crystallogr; 2013 May; 69(Pt 5):710-21. PubMed ID: 23633580
[TBL] [Abstract][Full Text] [Related]
17. Three-dimensional Structure Databases of Biological Macromolecules.
Waman VP; Orengo C; Kleywegt GJ; Lesk AM
Methods Mol Biol; 2022; 2449():43-91. PubMed ID: 35507259
[TBL] [Abstract][Full Text] [Related]
18. OneDep: Unified wwPDB System for Deposition, Biocuration, and Validation of Macromolecular Structures in the PDB Archive.
Young JY; Westbrook JD; Feng Z; Sala R; Peisach E; Oldfield TJ; Sen S; Gutmanas A; Armstrong DR; Berrisford JM; Chen L; Chen M; Di Costanzo L; Dimitropoulos D; Gao G; Ghosh S; Gore S; Guranovic V; Hendrickx PMS; Hudson BP; Igarashi R; Ikegawa Y; Kobayashi N; Lawson CL; Liang Y; Mading S; Mak L; Mir MS; Mukhopadhyay A; Patwardhan A; Persikova I; Rinaldi L; Sanz-Garcia E; Sekharan MR; Shao C; Swaminathan GJ; Tan L; Ulrich EL; van Ginkel G; Yamashita R; Yang H; Zhuravleva MA; Quesada M; Kleywegt GJ; Berman HM; Markley JL; Nakamura H; Velankar S; Burley SK
Structure; 2017 Mar; 25(3):536-545. PubMed ID: 28190782
[TBL] [Abstract][Full Text] [Related]
19. EMPIAR: a public archive for raw electron microscopy image data.
Iudin A; Korir PK; Salavert-Torres J; Kleywegt GJ; Patwardhan A
Nat Methods; 2016 May; 13(5):387-8. PubMed ID: 27067018
[No Abstract] [Full Text] [Related]
20. Navigating 3D electron microscopy maps with EM-SURFER.
Esquivel-Rodríguez J; Xiong Y; Han X; Guang S; Christoffer C; Kihara D
BMC Bioinformatics; 2015 May; 16():181. PubMed ID: 26025554
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
